Evidence map›Paper›PMID 24022510›Full record

ArticleTranslational psychiatry2013

Convergent functional genomics of stem cell-derived cells.

A B Niculescu

Abstract read
In one paragraph

Article in Translational psychiatry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

A B NiculescuDepartment of Psychiatry, Indiana University School of Medicine and Indianapolis VA Medical Center, Indianapolis, IN, USA.

Funding

Developing Blood Tests for Mood DisordersDP2OD007363 · OD · INDIANA UNIVERSITY INDIANAPOLIS · PI NICULESCU, ALEXANDER B · 2010 to 2010
$2.3M
Mood State Blood Biomarkers: A Discovery-Based ApproachI01CX000139 · VA · RLR VA MEDICAL CENTER · PI NICULESCU, ALEXANDER B · 2009 to 2017
–
CSRD VA I01 CX000139NIH HHS 1DP2OD007363NIH HHS DP2 OD007363
6 · The paper itself

Abstract

Stem cell technologies provide an exciting avenue to directly access the transcriptome of patients in neuronal-like cell types, which might have more direct relevance to brain research than other peripheral tissues (blood, fibroblasts). Enthusiasm should be tempered by concerns that artifacts and noise might be generated as part of the in vitro process of creating and maintaining these cell type. A solution may be to apply a Convergent Functional Genomics approach, where the data from stem cell-derived neuronal cells are integrated, cross-validated and prioritized using independent lines of evidence from other approaches and platforms (human genetic data, human postmortem brain data, animal model data). I provide a brief overview and an example in support of such an approach.

Indexed as

AnimalsGene Expression ProfilingGenomicsHumansInduced Pluripotent Stem CellsMental DisordersNeuroepithelial CellsNeurons

Identifiers

PMID24022510
PMCPMC3784767

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.