Evidence map›Paper›PMID 24022487›Full record

ArticleThe Journal of biological chemistry2013

Repetitive protein unfolding by the trans ring of the GroEL-GroES chaperonin complex stimulates folding.

Zong Lin, Jason Puchalla, Daniel Shoup, Hays S Rye

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Temperature Regulates Stability, Ligand Binding (MgJournal of the American Chemical Society · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Molecular chaperones maximize the native state yield on biological times by driving substrates out of equilibrium.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  9. The chaperone toolbox at the single-molecule level: From clamping to confining.Protein science : a publication of the Protein Society · 2017
    Review
  10. Article
  11. Article
  12. How do chaperonins fold protein?Biophysics (Nagoya-shi, Japan) · 2015
    Review
  13. Article
  14. Symmetric GroEL:GroES2 complexes are the protein-folding functional form of the chaperonin nanomachine.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Zong LinFrom the Department of Biotechnology and Biomedicine, Yangtze Delta Region Institute of Tsinghua University, Jiaxing, Zhejiang 314006, China.
Jason Puchalla
Daniel Shoup
Hays S Rye

Funding

Mechanisms of Chaperonin-Mediated Protein FoldingR01GM065421 · NIGMS · TEXAS A&M UNIVERSITY · PI RYE, HAYS S · 2003 to 2013
$2.5M
NIGMS NIH HHS GM065421NIGMS NIH HHS R01 GM065421
6 · The paper itself

Abstract

A key constraint on the growth of most organisms is the slow and inefficient folding of many essential proteins. To deal with this problem, several diverse families of protein folding machines, known collectively as molecular chaperones, developed early in evolutionary history. The functional role and operational steps of these remarkably complex nanomachines remain subjects of active debate. Here we present evidence that, for the GroEL-GroES chaperonin system, the non-native substrate protein enters the folding cycle on the trans ring of the double-ring GroEL-ATP-GroES complex rather than the ADP-bound complex. The properties of this ATP complex are designed to ensure that non-native substrate protein binds first, followed by ATP and finally GroES. This binding order ensures efficient occupancy of the open GroEL ring and allows for disruption of misfolded structures through two phases of multiaxis unfolding. In this model, repeated cycles of partial unfolding, followed by confinement within the GroEL-GroES chamber, provide the most effective overall mechanism for facilitating the folding of the most stringently dependent GroEL substrate proteins.

Indexed as

Protein FoldingChaperonin 10Chaperonin 60Escherichia coliEscherichia coli ProteinsRhodospirillum rubrumRibulose-Bisphosphate CarboxylaseChaperonin 10Chaperonin 60Escherichia coli ProteinsRibulose-Bisphosphate CarboxylaseChaperone ChaperoninGroELHsp60Molecular ChaperoneProtein DynamicsProtein FoldingProtein Misfolding

Identifiers

PMID24022487
PMCPMC3829408

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.