Evidence map›Paper›PMID 24022485›Full record

ArticleThe Journal of biological chemistry2013

Peroxiredoxin chaperone activity is critical for protein homeostasis in zinc-deficient yeast.

Colin W MacDiarmid, Janet Taggart, Kittikhun Kerdsomboon, Michael Kubisiak, Supawee Panascharoen, Katherine Schelble, David J Eide

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 63 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Screening and In Silico Analyses of the YeastFoods (Basel, Switzerland) · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Wine yeast peroxiredoxinMicroorganisms · 2020
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Colin W MacDiarmidFrom the Department of Nutritional Sciences, University of Wisconsin-Madison, Madison, Wisconsin 53706 and.
Janet Taggart
Kittikhun Kerdsomboon
Michael Kubisiak
Supawee Panascharoen
Katherine Schelble
David J Eide
University of Wisconsin–Madison · USMahidol University · TH

Funding

REGULATION OF CELLULAR ZINC HOMEOSTASISR01GM056285 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI EIDE, DAVID J · 1997 to 2022
$6.2M
NIGMS NIH HHS GM56285NIGMS NIH HHS R01 GM056285
6 · The paper itself

Abstract

Zinc is required for the folding and function of many proteins. In Saccharomyces cerevisiae, homeostatic and adaptive responses to zinc deficiency are regulated by the Zap1 transcription factor. One Zap1 target gene encodes the Tsa1 peroxiredoxin, a protein with both peroxidase and protein chaperone activities. Consistent with its regulation, Tsa1 is critical for growth under low zinc conditions. We previously showed that Tsa1's peroxidase function decreases the oxidative stress that occurs in zinc deficiency. In this report, we show that Tsa1 chaperone, and not peroxidase, activity is the more critical function in zinc-deficient cells. Mutations restoring growth to zinc-deficient tsa1 cells inactivated TRR1, encoding thioredoxin reductase. Because Trr1 is required for oxidative stress tolerance, this result implicated the Tsa1 chaperone function in tolerance to zinc deficiency. Consistent with this hypothesis, the tsa1Δ zinc requirement was complemented by a Tsa1 mutant allele that retained only chaperone function. Additionally, growth of tsa1Δ was also restored by overexpression of holdase chaperones Hsp26 and Hsp42, which lack peroxidase activity, and the Tsa1 paralog Tsa2 contributed to suppression by trr1Δ, even though trr1Δ inactivates Tsa2 peroxidase activity. The essentiality of the Tsa1 chaperone suggested that zinc-deficient cells experience a crisis of disrupted protein folding. Consistent with this model, assays of protein homeostasis suggested that zinc-limited tsa1Δ mutants accumulated unfolded proteins and induced a corresponding stress response. These observations demonstrate a clear physiological role for a peroxiredoxin chaperone and reveal a novel and unexpected role for protein homeostasis in tolerating metal deficiency.

Indexed as

Heat-Shock ProteinsHomeostasisPeroxidasesPeroxiredoxinsProtein FoldingSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsUnfolded Protein ResponseZincHeat-Shock ProteinsHSP26 protein, S cerevisiaeHSP42 protein, S cerevisiaePeroxidasesPeroxiredoxinsSaccharomyces cerevisiae ProteinsTranscription FactorsTsa1 protein, S cerevisiaeTsa2 protein, S cerevisiaeZAP1 protein, S cerevisiaeZincMolecular ChaperonePeroxiredoxinProtein FoldingYeastZinc

Identifiers

PMID24022485
PMCPMC3829442
OpenAlexW1970985436

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.