Evidence map›Paper›PMID 24019946›Full record

ArticlePloS one2013

Unraveling the evolution of the Atlantic cod's (Gadus morhua L.) alternative immune strategy.

Martin Malmstrøm, Sissel Jentoft, Tone F Gregers, Kjetill S Jakobsen

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. TLR25 is endosomally located and responds toFrontiers in immunology · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Atlantic cod (Frontiers in cell and developmental biology · 2023
    Article
  8. Macroevolutionary foundations of a recently evolved innate immune defense.Evolution; international journal of organic evolution · 2021
    Article
  9. Article
  10. Article
  11. Article
  12. Netting the Stress Responses in Fish.Frontiers in endocrinology · 2019
    Review
  13. Frontiers in immunology · 2019
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Martin MalmstrømCEES (Centre for Ecological and Evolutionary Synthesis), Department of Biosciences, University of Oslo, Oslo, Norway.
Sissel Jentoft
Tone F Gregers
Kjetill S Jakobsen
University of Oslo · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genes encoding the major histocompatibility complex (MHC) have been thought to play a vital role in the adaptive immune system in all vertebrates. The discovery that Atlantic cod (Gadus morhua) has lost important components of the MHC II pathway, accompanied by an unusually high number of MHC I genes, shed new light on the evolution and plasticity of the immune system of teleosts as well as in higher vertebrates. The overall aim of this study was to further investigate the highly expanded repertoire of MHC I genes using a cDNA approach to obtain sequence information of both the binding domains and the sorting signaling potential in the cytoplasmic tail. Here we report a novel combination of two endosomal sorting motifs, one tyrosine-based associated with exogenous peptide presentation by cross-presenting MHCI molecules, and one dileucine-based associated with normal MHC II functionality. The two signal motifs were identified in the cytoplasmic tail in a subset of the genes. This indicates that these genes have evolved MHC II-like functionality, allowing a more versatile use of MHC I through cross-presentation. Such an alternative immune strategy may have arisen through adaptive radiation and acquisition of new gene function as a response to changes in the habitat of its ancestral lineage.

Indexed as

Biological EvolutionAmino Acid SequenceAnimalsBase SequenceDNA PrimersGadiformesHistocompatibility Antigens Class IHistocompatibility Antigens Class IIMolecular Sequence DataPhylogenyPolymerase Chain ReactionSequence Homology, Amino AcidDNA PrimersHistocompatibility Antigens Class IHistocompatibility Antigens Class II

Identifiers

PMID24019946
PMCPMC3760826
OpenAlexW1987233085

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.