Evidence map›Paper›PMID 24019526›Full record

ArticleThe Journal of biological chemistry2013

The deviant ATP-binding site of the multidrug efflux pump Pdr5 plays an active role in the transport cycle.

Christopher Furman, Jitender Mehla, Neeti Ananthaswamy, Nidhi Arya, Bridget Kulesh, Ildiko Kovach, Suresh V Ambudkar, John Golin

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 46 citations in OpenAlex.

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  10. FK506 Resistance ofAntimicrobial agents and chemotherapy · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Christopher FurmanFrom the Departments of Biology and.
Jitender MehlaFrom the Departments of Biology and.
Neeti AnanthaswamyFrom the Departments of Biology and.
Nidhi AryaFrom the Departments of Biology and.
Bridget KuleshFrom the Departments of Biology and.
Ildiko KovachFrom the Departments of Biology and.
Suresh V AmbudkarLaboratory of Cell Biology, Center for Cancer Research, NCI, National Institutes of Health, Bethesda, Maryland 20892; Chemistry, Catholic University of America, Washington, D. C. 20064.
John GolinFrom the Departments of Biology and. Electronic address: golin@cua.edu.
National Institutes of Health · US

Funding

Biochemical Analysis of Multidrug Resistance-linked Transport ProteinsZIABC010030 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI AMBUDKAR, SURESH · 2009 to 2025
$21.6M
Molecular Genetic Analysis of Pdr5p, a Major Yeast Multidrug TransporterR15GM077211 · NIGMS · CATHOLIC UNIVERSITY OF AMERICA · PI GOLIN, JOHN · 2006 to 2017
$1.2M
MARC PROGRAM FOR BETHUNE-COOKMAN COLLEGET34GM007721 · NIGMS · BETHUNE-COOKMAN COLLEGE · PI SEN, SHUKDEB · 1985 to 1995
–
Intramural NIH HHS Z99 CA999999Intramural NIH HHS ZIA BC010030NIGMS NIH HHS GM07721NIGMS NIH HHS R15 GM077211
6 · The paper itself

Abstract

Pdr5 is the founding member of a large subfamily of evolutionarily distinct, clinically important fungal ABC transporters containing a characteristic, deviant ATP-binding site with altered Walker A, Walker B, Signature (C-loop), and Q-loop residues. In contrast to these motifs, the D-loops of the two ATP-binding sites have similar sequences, including a completely conserved aspartate residue. Alanine substitution mutants in the deviant Walker A and Signature motifs retain significant, albeit reduced, ATPase activity and drug resistance. The D-loop residue mutants D340A and D1042A showed a striking reduction in plasma membrane transporter levels. The D1042N mutation localized properly had nearly WT ATPase activity but was defective in transport and was profoundly hypersensitive to Pdr5 substrates. Therefore, there was a strong uncoupling of ATPase activity and drug efflux. Taken together, the properties of the mutants suggest an additional, critical intradomain signaling role for deviant ATP-binding sites.

Indexed as

Adenosine TriphosphatasesAmino Acid SubstitutionATP-Binding Cassette TransportersBinding SitesBiological Transport, ActiveDrug Resistance, Multiple, FungalMutation, MissenseProtein Structure, SecondaryProtein Structure, TertiarySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdenosine TriphosphatasesATP-Binding Cassette TransportersPDR5 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsABC TransporterATPasesDrug TransportMembrane ProteinsMultidrug Transporters

Identifiers

PMID24019526
PMCPMC3798506
OpenAlexW2127152943

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.