Evidence map›Paper›PMID 24019500›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Protein domain mimetics as in vivo modulators of hypoxia-inducible factor signaling.

Swati Kushal, Brooke Bullock Lao, Laura K Henchey, Ramin Dubey, Hanah Mesallati, Nathaniel J Traaseth, Bogdan Z Olenyuk, Paramjit S Arora

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 96 citations in OpenAlex.

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  18. A Sos proteomimetic as a pan-Ras inhibitor.Proceedings of the National Academy of Sciences of the United States of America · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Swati KushalDepartment of Pharmacology and Pharmaceutical Sciences, School of Pharmacy, University of Southern California, Los Angeles, CA 90089.
Brooke Bullock Lao
Laura K Henchey
Ramin Dubey
Hanah Mesallati
Nathaniel J Traaseth
Bogdan Z Olenyuk
Paramjit S Arora
New York University · USUniversity of Southern California · US

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ADRIANA HEGUY · 1985 to 2026
$83.1M
Biomolecular Recognition with Artificial Alpha-HelicesR01GM073943 · NIGMS · NEW YORK UNIVERSITY · PI ARORA, PARAMJIT S · 2005 to 2018
$4.4M
NCI NIH HHS 5P30CA16087-33NCI NIH HHS P30 CA016087NIGMS NIH HHS R01 GM073943NIGMS NIH HHS R01GM073943
6 · The paper itself

Abstract

Selective blockade of gene expression by designed small molecules is a fundamental challenge at the interface of chemistry, biology, and medicine. Transcription factors have been among the most elusive targets in genetics and drug discovery, but the fields of chemical biology and genetics have evolved to a point where this task can be addressed. Herein we report the design, synthesis, and in vivo efficacy evaluation of a protein domain mimetic targeting the interaction of the p300/CBP coactivator with the transcription factor hypoxia-inducible factor-1α. Our results indicate that disrupting this interaction results in a rapid down-regulation of hypoxia-inducible genes critical for cancer progression. The observed effects were compound-specific and dose-dependent. Gene expression profiling with oligonucleotide microarrays revealed effective inhibition of hypoxia-inducible genes with relatively minimal perturbation of nontargeted signaling pathways. We observed remarkable efficacy of the compound HBS 1 in suppressing tumor growth in the fully established murine xenograft models of renal cell carcinoma of the clear cell type. Our results suggest that rationally designed synthetic mimics of protein subdomains that target the transcription factor-coactivator interfaces represent a unique approach for in vivo modulation of oncogenic signaling and arresting tumor growth.

Indexed as

Amino Acid SequenceAnimalsAntineoplastic AgentsCell HypoxiaDown-RegulationFemaleGene Expression ProfilingHeLa CellsHumansHypoxia-Inducible Factor 1LigandsMiceMice, Inbred BALB CMolecular Sequence Datap300-CBP Transcription FactorsPeptidesAntineoplastic AgentsHypoxia-Inducible Factor 1Ligandsp300-CBP Transcription FactorsPeptidesVascular Endothelial Growth Factor Ahelix mimeticshydrogen bond surrogate helicesrational designsynthetic inhibitors of transcription

Identifiers

PMID24019500
PMCPMC3785738
OpenAlexW2024689678

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.