Evidence map›Paper›PMID 24017967›Full record

ArticleCell calcium2013

Synthesis and properties of Asante Calcium Red--a novel family of long excitation wavelength calcium indicators.

Krzysztof L Hyrc, Akwasi Minta, P Rogelio Escamilla, Patrick P L Chan, Xenia A Meshik, Mark P Goldberg

Open access · greenAbstract read
In one paragraph

Article in Cell calcium, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Fluorescent Indicators For Biological Imaging of Monatomic Ions.Frontiers in cell and developmental biology · 2022
    Review
  3. Control of hearing sensitivity by tectorial membrane calcium.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  4. Article
  5. Optical Probes for Neurobiological Sensing and Imaging.Accounts of chemical research · 2018
    Review
  6. Article
  7. Deep two-photon brain imaging with a red-shifted fluorometric Ca2+ indicator.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Krzysztof L HyrcThe Hope Center for Neurological Disorders, Washington University School of Medicine, St. Louis, MO 63110, USA; Center for the Investigation of Membrane Excitability Diseases, Washington University School of Medicine, St. Louis, MO 63110, USA; Alafi Neuroimaging Laboratory, Washington University School of Medicine, St. Louis, MO 63110, USA. Electronic address: hyrck@neuro.wustl.edu.
Akwasi Minta
P Rogelio Escamilla
Patrick P L Chan
Xenia A Meshik
Mark P Goldberg
Hope Center for Neurological Disorders · USWashington University in St. Louis · US

Funding

ZINC AND ISCHEMIC BRAIN INJURYP01NS032636 · NINDS · WASHINGTON UNIVERSITY · PI LEE, JIN-MOO · 1995 to 2010
$13.2M
Washington University Center for Translational NeuroscienceP30NS057105 · NINDS · WASHINGTON UNIVERSITY · PI HOLTZMAN, DAVID M. · 2006 to 2011
$8.7M
CONTROL OF SYNAPTIC GLUTAMATE RELEASER01MH078823 · NIMH · WASHINGTON UNIVERSITY · PI MENNERICK, STEVEN J · 2006 to 2015
$3.2M
OLIGODENDROCYTE DEATH IN CEREBRAL ISCHEMIAR01NS036265 · NINDS · WASHINGTON UNIVERSITY · PI GOLDBERG, MARK PAUL · 1997 to 2007
$1.7M
NIMH NIH HHS R01 MH078823NINDS NIH HHS P01 NS032636NINDS NIH HHS P30 NS057105NINDS NIH HHS R01 NS036265NINDS NIH HHS R01 NS36265
6 · The paper itself

Abstract

Although many synthetic calcium indicators are available, a search for compounds with improved characteristics continues. Here, we describe the synthesis and properties of Asante Calcium Red-1 (ACR-1) and its low affinity derivative (ACR-1-LA) created by linking BAPTA to seminaphthofluorescein. The indicators combine a visible light (450-540 nm) excitation with deep-red fluorescence (640 nm). Upon Ca2+ binding, the indicators raise their fluorescence with longer excitation wavelengths producing higher responses. Although the changes occur without any spectral shifts, it is possible to ratio Ca(2+)-dependent (640 nm) and quasi-independent (530 nm) emission when using visible (< 490 nm) or multiphoton (∼780 nm) excitation. Therefore, both probes can be used as single wavelength or, less dynamic, ratiometric indicators. Long indicator emission might allow easy [Ca2+]i measurement in GFP expressing cells. The indicators bind Ca2+ with either high (Kd = 0.49 ± 0.07 μM; ACR-1) or low affinity (Kd = 6.65 ± 0.13 μM; ACR-1-LA). Chelating Zn2+ (Kd = 0.38 ± 0.02 nM) or Mg2+ (Kd∼5mM) slightly raises and binding Co2+ quenches dye fluorescence. New indicators are somewhat pH-sensitive (pKa = 6.31 ± 0.07), but fairly resistant to bleaching. The probes are rather dim, which combined with low AM ester loading efficiency, might complicate in situ imaging. Despite potential drawbacks, ACR-1 and ACR-1-LA are promising new calcium indicators.

Indexed as

LightAniline CompoundsAnimalsCalciumCalibrationFluorescent DyesGreen Fluorescent ProteinsHEK293 CellsHeterocyclic Compounds, 4 or More RingsHumansHydrogen-Ion ConcentrationIndicators and ReagentsIonsMiceMicroscopy, ConfocalNeuronsAniline Compoundsasante calcium red-1CalciumFluorescent DyesGreen Fluorescent ProteinsHeterocyclic Compounds, 4 or More RingsIndicators and ReagentsIonsConfocal microscopyDissociation constantEmission spectraExcitation spectraFluorescenceIntracellular free calcium concentrationMagnesium ionsMultiphoton microscopyNeuronsRatio imagingZinc ions

Identifiers

PMID24017967
PMCPMC3808196
OpenAlexW2108714033

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.