Evidence map›Paper›PMID 24015178›Full record

ArticlePloS one2013

Full genome sequencing of Corriparta virus, identifies California mosquito pool virus as a member of the Corriparta virus species.

Manjunatha N Belaganahalli, Sushila Maan, Narender S Maan, Kyriaki Nomikou, Marc Guimera, Joe Brownlie, Robert Tesh, Houssam Attoui, Peter P C Mertens

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Manjunatha N BelaganahalliThe Vector-Borne Viral Diseases Programme, The Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom.
Sushila Maan
Narender S Maan
Kyriaki Nomikou
Marc Guimera
Joe Brownlie
Robert Tesh
Houssam Attoui
Peter P C Mertens
The Pirbright Institute · GBRoyal Veterinary College · GBThe University of Texas Medical Branch at Galveston · USUniversity of Veterinary and Animal Sciences · PK

Funding

Biotechnology and Biological Sciences Research Council BBS/E/I/00001144Biotechnology and Biological Sciences Research Council BBS/E/I/00001446Wellcome Trust
6 · The paper itself

Abstract

The species Corriparta virus (CORV), within the genus Orbivirus, family Reoviridae, currently contains six virus strains: corriparta virus MRM1 (CORV-MRM1); CS0109; V654; V370; Acado virus and Jacareacanga virus. However, lack of neutralization assays, or reference genome sequence data has prevented further analysis of their intra-serogroup/species relationships and identification of individual serotypes. We report whole-genome sequence data for CORV-MRM1, which was isolated in 1960 in Australia. Comparisons of the conserved, polymerase (VP1), sub-core-shell 'T2' and core-surface 'T13' proteins encoded by genome segments 1, 2 and 8 (Seg-1, Seg-2 and Seg-8) respectively, show that this virus groups with the other mosquito borne orbiviruses. However, highest levels of nt/aa sequence identity (75.9%/91.6% in Seg-2/T2: 77.6%/91.7% in Seg-8/T13, respectively) were detected between CORV-MRM1 and California mosquito pool virus (CMPV), an orbivirus isolated in the USA in 1974, showing that they belong to the same virus species. The data presented here identify CMPV as a member of the Corriparta virus species and will facilitate identification of additional CORV isolates, diagnostic assay design and epidemiological studies.

Indexed as

Genome, ViralDNA, IntergenicMultilocus Sequence TypingOrbivirusPhylogenySequence Homology, Amino AcidSequence Homology, Nucleic AcidViral Structural ProteinsDNA, IntergenicViral Structural Proteins

Identifiers

PMID24015178
PMCPMC3754974
OpenAlexW1985786139

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.