Evidence map›Paper›PMID 24015038›Full record

ArticleJournal of Korean medical science2013

Association of polymorphisms in the vitamin D receptor promoter with idiopathic short stature.

Seo Kyung Choi, Mun Suk Park, Jun Kyu Song, Kyung Sik Yoon, Kyung Lim Yoon, Kye Shik Shim

Open access · goldAbstract read
In one paragraph

Article in Journal of Korean medical science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Trial
  2. Article
  3. Genetic variations in the vitamin-D receptor (VDR) gene in preeclampsia patients in the Chinese Han population.Hypertension research : official journal of the Japanese Society of Hypertension · 2015
    Article
  4. Association between vitamin D receptor polymorphisms and osteoporosis in patients with COPD.International journal of chronic obstructive pulmonary disease · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Seo Kyung ChoiDepartment of Pediatrics, Kyung Hee University School of Medicine, Seoul, Korea.
Mun Suk Park
Jun Kyu Song
Kyung Sik Yoon
Kyung Lim Yoon
Kye Shik Shim
Kyung Hee University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genetic alterations of vitamin D receptor (VDR) are related with the growth of long bone. There were a lot of reports regarding an association of polymorphisms in the VDR promoter with many disorders, but not with idiopathic short stature (ISS). We investigated the association of them with ISS. A total of 50 subjects, including 29 ISS patients and 21 healthy controls with their heights within the normal range was recruited. We selected two single nucleotide polymorphisms (SNPs) from VDR promoter (rs11568820 at the Cdx-2 binding site upstream of exon 1e and rs4516035 at -1012 upstream of exon 1a) as candidates, respectively. In genotype analysis, the frequency of A/A genotype at the Cdx-2 binding site locus (rs11568820) upstream of exon 1e of VDR was decreased to 6.9% in ISS patients (28.6% in controls) (P = 0.027). The genetic variation at the Cdx-2 binding site of VDR promoter can be a contributing factor of growth of height.

Indexed as

Polymorphism, Single NucleotideAdolescentAllelesBinding SitesCDX2 Transcription FactorChildDwarfismExonsFemaleGene FrequencyGenotypeHomeodomain ProteinsHumansMalePromoter Regions, GeneticReceptors, CalcitriolCDX2 protein, humanCDX2 Transcription FactorHomeodomain ProteinsReceptors, CalcitriolPolymorphism, GeneticShort Stature, IdiopathicVitamin D Receptor Promoter

Identifiers

PMID24015038
PMCPMC3763107
OpenAlexW2165001880

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.