Evidence map›Paper›PMID 24013668›Full record

ArticleNature immunology2013

Selective regulation of lymphopoiesis and leukemogenesis by individual zinc fingers of Ikaros.

Hilde Schjerven, Jami McLaughlin, Teresita L Arenzana, Seth Frietze, Donghui Cheng, Sarah E Wadsworth, Gregory W Lawson, Steven J Bensinger, Peggy J Farnham, Owen N Witte and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nature immunology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
14.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 103 citations in OpenAlex.

  1. Review
  2. Article
  3. Genetic susceptibility ofGlobal medical genetics · 2025
    Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. IKAROS Family Transcription Factors in Lymphocyte Differentiation and Function.Advances in experimental medicine and biology · 2024
    Review
  9. Article
  10. Dominant negative variants inJournal of medical genetics · 2023
    Article
  11. Ikaros is a principal regulator of AireScience immunology · 2023
    Article
  12. Review
  13. IKAROS in Acute Leukemia: A Positive Influencer or a Mean Hater?International journal of molecular sciences · 2023
    Review
  14. Review
  15. Frontiers in immunology · 2023
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. A Point Mutation in IKAROS ZF1 Causes a B Cell Deficiency in Mice.Journal of immunology (Baltimore, Md. : 1950) · 2021
    Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Hilde Schjerven1] Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, California, USA. [2] Molecular Biology Institute, University of California, Los Angeles, California, USA. [3].ORCID 0000000192873375
Jami McLaughlin
Teresita L Arenzana
Seth Frietze
Donghui Cheng
Sarah E Wadsworth
Gregory W Lawson
Steven J Bensinger
Peggy J Farnham
Owen N Witte
Stephen T Smale
University of California, Los Angeles · USHoward Hughes Medical Institute · USUniversity of Southern California · US

Funding

Production Center for Global Mapping of Regulatory ElementsU54HG004558 · NHGRI · YALE UNIVERSITY · PI SNYDER, MICHAEL P. · 2007 to 2011
$15.4M
REGULATION OF TDT EXPRESSION DURING LYMPHOPOIESISR01DK043726 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SMALE, STEPHEN T · 1996 to 2014
$4.2M
Howard Hughes Medical InstituteNHGRI NIH HHS U54HG004558NIDDK NIH HHS R01 DK043726NIDDK NIH HHS R01DK043726
6 · The paper itself

Abstract

C2H2 zinc fingers are found in several key transcriptional regulators in the immune system. However, these proteins usually contain more fingers than are needed for sequence-specific DNA binding, which suggests that different fingers regulate different genes and functions. Here we found that mice lacking finger 1 or finger 4 of Ikaros exhibited distinct subsets of the hematological defects of Ikaros-null mice. Most notably, the two fingers controlled different stages of lymphopoiesis, and finger 4 was selectively required for tumor suppression. The distinct defects support the hypothesis that only a small number of genes that are targets of Ikaros are critical for each of its biological functions. The subcategorization of functions and target genes by mutagenesis of individual zinc fingers will facilitate efforts to understand how zinc-finger transcription factors regulate development, immunity and disease.

Indexed as

Gene Expression RegulationAnimalsBase SequenceBinding SitesB-LymphocytesCell DifferentiationCell Transformation, NeoplasticChromatin ImmunoprecipitationCluster AnalysisFusion Proteins, bcr-ablGene Expression ProfilingGerm-Line MutationHigh-Throughput Nucleotide SequencingIkaros Transcription FactorImmunophenotypingLeukemiaFusion Proteins, bcr-ablIkaros Transcription FactorZfpn1a1 protein, mouse

Identifiers

PMID24013668
PMCPMC3800053
OpenAlexW1998211546

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.