Evidence map›Paper›PMID 24012855›Full record

ArticleClinical biochemistry2013

A bioassay for Lafora disease and laforin glucan phosphatase activity.

Amanda R Sherwood, Mary Beth Johnson, Antonio V Delgado-Escueta, Matthew S Gentry

Open access · greenAbstract read
In one paragraph

Article in Clinical biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Assessing the Biological Activity of the Glucan Phosphatase Laforin.Methods in molecular biology (Clifton, N.J.) · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Amanda R SherwoodDepartment of Molecular and Cellular Biochemistry, Center for Structural Biology, University of Kentucky, Lexington, KY 405036-0001, USA.
Mary Beth Johnson
Antonio V Delgado-Escueta
Matthew S Gentry
University of Kentucky · USUniversity of California, Los Angeles · US

Funding

Transgenic Mouse and Biobank CoreP01CA095616 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BRENNAN, CAMERON · 2003 to 2012
$20.3M
UNDERSTANDING THE MOLECULAR BASIS OF EPIGENETIC TRANSCRIPTIONAL SILENCINGP20RR020171 · NCRR · UNIVERSITY OF KENTUCKY · PI RODGERS, DAVID W · 2004 to 2011
$16.5M
UC Davis/NIH NeuroMab FacilityU24NS050606 · NINDS · UNIVERSITY OF CALIFORNIA DAVIS · PI TRIMMER, JAMES S · 2005 to 2014
$15.6M
Kentucky Center for Clinical and Translational ScienceUL1TR000117 · NCATS · UNIVERSITY OF KENTUCKY · PI KERN, PHILIP A · 2012 to 2015
$13.3M
Regulation, Signaling, and Dynamics of Glucan PhosphatasesR01NS070899 · NINDS · UNIVERSITY OF KENTUCKY · PI GENTRY, MATTHEW S. · 2010 to 2019
$3.6M
Kentucky Center for Clinical and Translational ScienceTL1TR000115 · NCATS · UNIVERSITY OF KENTUCKY · PI KERN, PHILIP A · 2012 to 2015
$518k
Kentucky Center for Clinical and Translational ScienceTL1RR033172 · NCRR · UNIVERSITY OF KENTUCKY · PI KERN, PHILIP A · 2011 to 2011
$161k
NCATS NIH HHS TL1 TR000115NCATS NIH HHS UL1 TR000117NCI NIH HHS P01 CA095616NCRR NIH HHS P20 RR020171NCRR NIH HHS P20RR020171NCRR NIH HHS TL1 RR033172NINDS NIH HHS R01 NS070899NINDS NIH HHS R01NS070899NINDS NIH HHS U24 NS050606NINDS NIH HHS U24NS050606
6 · The paper itself

Abstract

objectivesLafora disease is a rare yet invariably fatal form of progressive neurodegenerative epilepsy resulting from mutations in the phosphatase laforin. Several therapeutic options for Lafora disease patients are currently being explored, and these therapies would benefit from a biochemical means of assessing functional laforin activity following treatment. To date, only clinical outcomes such as decreases in seizure frequency and severity have been used to indicate success of epilepsy treatment. However, these qualitative measures exhibit variability and must be assessed over long periods of time. In this work, we detail a simple and sensitive bioassay that can be used for the detection of functional endogenous laforin from human and mouse tissue. DESIGN AND

methodsWe generated antibodies capable of detecting and immunoprecipitating endogenous laforin. Following laforin immunoprecipitation, laforin activity was assessed via phosphatase assays using para-nitrophenylphosphate (pNPP) and a malachite green-based assay specific for glucan phosphatase activity.

resultsWe found that antibody binding to laforin does not impede laforin activity. Furthermore, the malachite green-based glucan phosphatase assay used in conjunction with a rabbit polyclonal laforin antibody was capable of detecting endogenous laforin activity from human and mouse tissues. Importantly, this assay discriminated between laforin activity and other phosphatases.

conclusionsThe bioassay that we have developed utilizing laforin antibodies and an assay specific for glucan phosphatase activity could prove valuable in the rapid detection of functional laforin in patients to which novel Lafora disease therapies have been administered.

Indexed as

AnimalsBiological AssayDual-Specificity PhosphatasesHep G2 CellsHumansImmunoprecipitationLafora DiseaseMiceMice, Inbred C57BLMuscle, SkeletalNitrophenolsOrganophosphorus CompoundsProtein Tyrosine Phosphatases, Non-ReceptorRabbitsRosaniline DyesSkinDual-Specificity PhosphatasesEPM2A protein, humanEpm2a protein, mousemalachite greenNitrophenolsnitrophenylphosphateOrganophosphorus CompoundsProtein Tyrosine Phosphatases, Non-ReceptorRosaniline DyesBioassaybovine serum albuminBSAcarbohydrate binding moduleCBMcerebrospinal fluidCSFdithiothreitolDSPDTTdual specificity phosphataseEpilepsyGlucan phosphataseHEKhorseradish peroxidaseHRPhuman embryonic kidneyLafora bodyLafora diseaseLaforinLBLDMalachite greenmodified RIPA buffermRIPApara-nitrophenylphosphatePASpcDNA3.1 FLAGpcDNA3.1 with N-terminal FLAG tagperiodic acid SchiffpNPPTBSTris-buffered saline

Identifiers

PMID24012855
PMCPMC3864130
OpenAlexW2040040109

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.