Evidence map›Paper›PMID 24011459›Full record

ArticleNeurogastroenterology and motility2014

Expression and function of NIK- and IKK2-binding protein (NIBP) in mouse enteric nervous system.

Y Zhang, D Bitner, A A Pontes Filho, F Li, S Liu, H Wang, F Yang, S Adhikari, J Gordon, S Srinivasan and 1 more

Open access · greenAbstract read
In one paragraph

Article in Neurogastroenterology and motility, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  4. Identification ofFrontiers in veterinary science · 2022
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  5. Review
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  10. Review
  11. A homozygous founder mutation inJournal of medical genetics · 2018
    Article
  12. Expression of NIBP and its clinical significance in human early colorectal cancer.International journal of clinical and experimental pathology · 2017
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Y ZhangDepartment of Neuroscience, Temple University School of Medicine, Philadelphia, PA, USA.
D Bitner
A A Pontes Filho
F Li
S Liu
H Wang
F Yang
S Adhikari
J Gordon
S Srinivasan
W Hu
Temple University · USEmory University · US

Funding

Viral Gene Editing and Bioinformatics Core for Institution # 269291P30MH092177 · NIMH · TEMPLE UNIV OF THE COMMONWEALTH · PI Ilker Kudret Sariyer · 2011 to 2026
$24.9M
Mechanism of Enteric NeuropathyR01DK080684 · NIDDK · EMORY UNIVERSITY · PI Shanthi K Srinivasan · 2009 to 2026
$6.1M
Regulation of gut smooth muscle contraction and relaxation by cytokinesR01DK075964 · NIDDK · VIRGINIA COMMONWEALTH UNIVERSITY · PI HU, WENHUI · 2007 to 2016
$2.9M
Role and mechanism of NIBP/NFkB signaling in neurogenesisR01MH101041 · NIMH · TEMPLE UNIV OF THE COMMONWEALTH · PI HU, WENHUI · 2013 to 2015
$594k
NIDDK NIH HHS DK075964NIDDK NIH HHS DK080684NIDDK NIH HHS R01 DK075964NIDDK NIH HHS R01 DK080684NIMH NIH HHS P30 MH092177NIMH NIH HHS R01 MH101041
6 · The paper itself

Abstract

backgroundNIK- and IKK2-binding protein (NIBP)/TRAPPC9 is expressed in brain neurons, and human NIBP mutations are associated with neurodevelopmental disorders. The cellular distribution and function of NIBP in the enteric nervous system (ENS) remain unknown.

methodsWestern blot and reverse transcription-polymerase chain reaction analysis were used respectively to identify the protein and mRNA expression of NIBP and other neuronal markers. Multi-labeled immunofluorescent microscopy and confocal image analysis were used to examine the cellular distribution of NIBP-like immunoreactivity (IR) in whole mount intestine. Enteric neuronal cell line (ENC) was infected with lentivirus carrying NIBP or its shRNA expression vectors and treated with vehicle or tumor necrosis factor (TNF)α. KEY

resultsNIBP is expressed at both mRNA and protein levels in different regions and layers of the mouse intestine. NIBP-like-IR was co-localized with various neuronal markers, but not with glial, smooth muscular, or interstitial cells of Cajal markers. A small population of NIBP-expressing cells and fibers in extra-ganglionic and intra-ganglionic area were negative for pan-neuronal markers HuD or Peripherin. Relatively high NIBP-like-IR was found in 35-44% of myenteric neurons and 9-10% of submucosal neurons. Approximately 98%, 87%, and 43% of these relatively high NIBP-expressing neurons were positive for choline acetyltransferase, neuronal nitric oxide synthase and Calretinin, respectively. NIBP shRNA knockdown in ENC inhibited TNFα-induced NFκB activation and neuronal differentiation, whereas NIBP overexpression promoted it. CONCLUSIONS & INFERENCES: NIBP is extensively expressed in the ENS with relatively high level in a subpopulation of enteric neurons. Various NIBP expression levels in different neurons may represent dynamic trafficking or posttranslational modification of NIBP in some functionally active neurons and ultimately regulate ENS plasticity.

Indexed as

Gene Expression RegulationAmino Acid SequenceAnimalsCarrier ProteinsCell DifferentiationCell Line, TransformedEnteric Nervous SystemHEK293 CellsHumansI-kappa B KinaseIntercellular Signaling Peptides and ProteinsMiceMice, Inbred C57BLMice, KnockoutMice, TransgenicMolecular Sequence DataCarrier ProteinsI-kappa B KinaseIkbkb protein, mouseIntercellular Signaling Peptides and ProteinsNF-kappaB-Inducing KinaseProtein Serine-Threonine KinasesTRAPPC9 protein, humanconfocal imagecytokinesenteric nervous systementeric neuronal cell lineimmunohistochemistryNFκBTRAPPC9/NIBP

Identifiers

PMID24011459
PMCPMC3962790
OpenAlexW1969137895

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.