Evidence map›Paper›PMID 24010735›Full record

ArticleBMC infectious diseases2013

Genotypic and phenotypic analysis of diarrheagenic Escherichia coli strains isolated from Brazilian children living in low socioeconomic level communities.

Diego M Lozer, Tamara B Souza, Mariane V Monfardini, Fernando Vicentini, Sônia S Kitagawa, Isabel C A Scaletsky, Liliana C Spano

Abstract read
In one paragraph

Article in BMC infectious diseases, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. EnteropathogeniceLife · 2026
    Article
  3. Article
  4. Article
  5. EnteroaggregativeEcoSal Plus · 2025
    Review
  6. High prevalence of enterotoxigenicFrontiers in microbiology · 2025
    Article
  7. Prevalence of DiarrhoeagenicMicroorganisms · 2023
    Article
  8. Article
  9. Transposon mutagenesis of atypical enteroaggregativeFrontiers in cellular and infection microbiology · 2023
    Article
  10. Article
  11. Article
  12. Hybrid Atypical Enteropathogenic and ExtraintestinalPathogens (Basel, Switzerland) · 2021
    Article
  13. Improved Genomic Identification, Clustering, and Serotyping of Shiga Toxin-ProducingFrontiers in cellular and infection microbiology · 2021
    Article
  14. Genomic characterization of enteropathogenicThe veterinary quarterly · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Shiga-Toxin ProducingMicroorganisms · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Diego M LozerDepartamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal de São Paulo, Rua Botucatu, 862, 3 andar, 04023-062, São Paulo, Brazil. scaletskyunifesp@gmail.com.
Tamara B Souza
Mariane V Monfardini
Fernando Vicentini
Sônia S Kitagawa
Isabel C A Scaletsky
Liliana C Spano

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundChildhood diarrheal diseases remain highly endemic in developing areas of Brazil. The importance of Escherichia coli among children with diarrhea in these areas was unknown. This study determined the prevalence of different E. coli categories in symptomatic and asymptomatic children from low socioeconomic level rural communities in southeastern Brazil.

methodsA total of 560 stool samples were collected from 141 children with diarrhea (< 10 years) and 419 apparently healthy controls who resided in 23 communities. E. coli isolates (n = 1943) were subjected to two multiplex PCRs developed for the detection of enteropathogenic E. coli (EPEC), enteroaggregative E. coli (EAEC), diffusely adherent E. coli (DAEC), enterotoxigenic E. coli (ETEC), enteroinvasive E. coli (EIEC), and Shiga toxin-producing E. coli (STEC). Strains were also examined for the presence of EPEC, EAEC, and DAEC by assays of adhesion to HEp-2 cells and by hybridization with specific DNA probes.

resultsDiarrheagenic E. coli strains were isolated from 253 (45.2%) children, and were associated with diarrhea in children aged < 5 years (p < 0.001). EAEC (20.9%), DAEC (11.6%), EPEC (9.3%) were the most frequent pathotypes, followed by ETEC (2.7%), EIEC (0.5%), and STEC (0.2%). Depending of the assay, EPEC, EAEC, and DAEC (collectively termed enteroadherent E. coli) strains were isolated in 45% to 56% of diarrhea cases, a significantly higher incidence than in controls (P < 0.05). Individually, only DAEC showed significant association with diarrhea (p < 0.05), particularly in children aged 2-5 years.

conclusionThis study indicates that enteroadherent E. coli is an important cause of diarrhea in children living in low socioeconomic level communities in southeastern Brazil. Our results reveal that the PCR1 assay is an excellent tool for the identification of EAEC and DAEC.

Indexed as

BrazilChild, PreschoolDiarrheaEnteropathogenic Escherichia coliEscherichia coli InfectionsFecesFemaleGenotypeHumansIncidenceInfantMalePhenotypePoverty

Identifiers

PMID24010735
PMCPMC3846636

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.