Evidence map›Paper›PMID 24010666›Full record

ArticleBiophysical journal2013

Effect of proline mutations on the monomer conformations of amylin.

Chi-cheng Chiu, Sadanand Singh, Juan J de Pablo

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Mammals that can develop type 2 diabetes have a similarly structured β-sheet amyloid oligomer.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. The Molecular Physiopathogenesis of Islet Amyloidosis.Handbook of experimental pharmacology · 2018
    Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Uncovering the Mechanism of Aggregation of Human Transthyretin.The Journal of biological chemistry · 2015
    Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Chi-cheng ChiuMaterials Science Division, Argonne National Laboratory, Argonne, Illinois, USA.
Sadanand Singh
Juan J de Pablo
Argonne National Laboratory · USUniversity of Chicago · USUniversity of Wisconsin–Madison · US

Funding

Mechanism of membrane-catalyzed amyloid formation in diabetesR01DK088184 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI DE PABLO, JUAN J, SKINNER, JAMES L · 2010 to 2011
$708k
NIDDK NIH HHS 1R01DK088184NIDDK NIH HHS R01 DK088184
6 · The paper itself

Abstract

The formation of human islet amyloid polypeptide (hIAPP) is implicated in the loss of pancreatic β-cells in type II diabetes. Rat amylin, which differs from human amylin at six residues, does not lead to formation of amyloid fibrils. Pramlintide is a synthetic analog of human amylin that shares three proline substitutions with rat amylin. Pramlintide has a much smaller propensity to form amyloid aggregates and has been widely prescribed in amylin replacement treatment. It is known that the three prolines attenuate β-sheet formation. However, the detailed effects of these proline substitutions on full-length hIAPP remain poorly understood. In this work, we use molecular simulations and bias-exchange metadynamics to investigate the effect of proline substitutions on the conformation of the hIAPP monomer. Our results demonstrate that hIAPP can adopt various β-sheet conformations, some of which have been reported in experiments. The proline substitutions perturb the formation of long β-sheets and reduce their stability. More importantly, we find that all three proline substitutions of pramlintide are required to inhibit β conformations and stabilize the α-helical conformation. Fewer substitutions do not have a significant inhibiting effect.

Indexed as

Molecular Dynamics SimulationMutationProlineAmino Acid SequenceAmino Acid SubstitutionAnimalsHumansIslet Amyloid PolypeptideMolecular Sequence DataMonte Carlo MethodMutant ProteinsProtein ConformationProtein FoldingThermodynamicsIslet Amyloid PolypeptideMutant ProteinspramlintideProline

Identifiers

PMID24010666
PMCPMC3762349
OpenAlexW2001152577

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.