Evidence map›Paper›PMID 24006438›Full record

ArticleJournal of virology2013

Encapsidation of host-derived factors correlates with enhanced infectivity of Sindbis virus.

Kevin J Sokoloski, Anthony J Snyder, Natalia H Liu, Chelsea A Hayes, Suchetana Mukhopadhyay, Richard W Hardy

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Current perspectives on alphavirus encapsidation, assembly and budding.Frontiers in cellular and infection microbiology · 2025
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Ribosomal control in RNA virus-infected cells.Frontiers in microbiology · 2022
    Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Kevin J SokoloskiDepartment of Biology, Indiana University, Bloomington, Indiana, USA.
Anthony J Snyder
Natalia H Liu
Chelsea A Hayes
Suchetana Mukhopadhyay
Richard W Hardy
Indiana University Bloomington · US

Funding

TRAINING IN GENETICST32GM007757 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI KUMAR, JUSTIN P · 1985 to 2014
$8.1M
Host determinants of alphavirus replicationR01AI090077 · NIAID · TRUSTEES OF INDIANA UNIVERSITY · PI HARDY, RICHARD W · 2010 to 2014
$1.8M
Characterizing the Role of Encapsidated Host Ribosomes in Alphavirus InfectivityF32AI104217 · NIAID · TRUSTEES OF INDIANA UNIVERSITY · PI SOKOLOSKI, KEVIN JOSEPH · 2013 to 2014
$107k
NIAID NIH HHS F32 AI104217NIAID NIH HHS R01 AI090077NIGMS NIH HHS T32 GM007757
6 · The paper itself

Abstract

The genus Alphavirus consists of a group of enveloped, single-stranded RNA viruses, many of which are transmitted by arthropods to a wide range of vertebrate host species. Here we report that Sindbis virus (SINV) produced from a representative mammalian cell line consists of at least two unique particle subpopulations, separable on the basis of virion density. In contrast, mosquito-derived SINV consists of a homogeneous population of particles. Our findings indicate that the denser particle subpopulation, SINV(Heavy), is more infectious on a per-particle basis than SINV(Light). SINV produced in mosquito cell lines (SINV(C6/36)) exhibited particle-to-PFU ratios similar to those observed for SINV(Heavy). In mammalian cells, viral RNA was synthesized and accumulated more rapidly following infection with SINV(Heavy) or SINV(C6/36) than following infection with SINV(Light), due partly to enhanced translation of viral genomic RNA early in infection. Analysis of the individual particle subpopulations indicated that SINV(Heavy) and SINV(C6/36) contain host-derived factors whose presence correlates with the enhanced translation, RNA synthesis, and infectivity observed for these particles.

Indexed as

Host-Pathogen InteractionsAlphavirus InfectionsAnimalsCells, CulturedCricetinaeCross-Linking ReagentsCulicidaeFibroblastsHEK293 CellsHumansImmunoprecipitationKidneyMicePolymerase Chain ReactionRNA, ViralSindbis VirusCross-Linking ReagentsRNA, Viral

Identifiers

PMID24006438
PMCPMC3807880
OpenAlexW2013340685

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.