Evidence map›Paper›PMID 24006418›Full record

ArticleJournal of experimental botany2013

Dissecting the genetic architecture of frost tolerance in Central European winter wheat.

Yusheng Zhao, Manje Gowda, Tobias Würschum, C Friedrich H Longin, Viktor Korzun, Sonja Kollers, Ralf Schachschneider, Jian Zeng, Rohan Fernando, Jorge Dubcovsky and 1 more

Abstract read
In one paragraph

Article in Journal of experimental botany, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Article
  2. Article
  3. Molecular mapping of two novel cold resistance genes in common wheat by 660K SNP array.Molecular breeding : new strategies in plant improvement · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Capturing Wheat Phenotypes at the Genome Level.Frontiers in plant science · 2022
    Review
  9. Article
  10. Article
  11. The potential of hybrid breeding to enhance leaf rust and stripe rust resistance in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yusheng ZhaoDepartment of Cytogenetics and Genome Analysis, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), D-06466 Gatersleben, Germany.
Manje Gowda
Tobias Würschum
C Friedrich H Longin
Viktor Korzun
Sonja Kollers
Ralf Schachschneider
Jian Zeng
Rohan Fernando
Jorge Dubcovsky
Jochen C Reif

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Abiotic stress tolerance in plants is pivotal to increase yield stability, but its genetic basis is still poorly understood. To gain insight into the genetic architecture of frost tolerance, this work evaluated a large mapping population of 1739 wheat (Triticum aestivum L.) lines and hybrids adapted to Central Europe in field trials in Germany and fingerprinted the lines with a 9000 single-nucleotide polymorphism array. Additive effects prevailed over dominance effects. A two-dimensional genome scan revealed the presence of epistatic effects. Genome-wide association mapping in combination with a robust cross-validation strategy identified one frost tolerance locus with a major effect located on chromosome 5B. This locus was not in linkage disequilibrium with the known frost loci Fr-B1 and Fr-B2. The use of the detected diagnostic markers on chromosome 5B, however, does not allow prediction of frost tolerance with high accuracy. Application of genome-wide selection approaches that take into account also loci with small effect sizes considerably improved prediction of the genetic variation of frost tolerance in wheat. The developed prediction model is valuable for improving frost tolerance because this trait displays a wide variation in occurrence across years and is therefore a difficult target for conventional phenotypic selection.

Indexed as

FreezingSeasonsAdaptation, PhysiologicalBayes TheoremEuropeGenetic MarkersGenetic VariationHybridization, GeneticLinkage DisequilibriumPolymorphism, Single NucleotideReproducibility of ResultsTriticumGenetic MarkersAssociation mappingcross-validationfrost tolerancegenomic selectionTriticum aestivumwheat.

Identifiers

PMID24006418
PMCPMC3808325

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.