Evidence map›Paper›PMID 24005468›Full record

ArticleJAMA surgery2013

The correlation between the expression of differentiation markers in rat small intestinal mucosa and the transcript levels of schlafen 3.

Pavlo L Kovalenko, Marc D Basson

Abstract read
In one paragraph

Article in JAMA surgery, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

  1. Observational
  2. Article
  3. Loss of Slfn3 induces a sex-dependent repair vulnerability after 50% bowel resection.American journal of physiology. Gastrointestinal and liver physiology · 2021
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Schlafen 3 Mediates the Differentiating Effects of Cdx2 in Rat IEC-Cdx2L1 Enterocytes.Journal of investigative surgery : the official journal of the Academy of Surgical Research · 2015
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Pavlo L KovalenkoDepartment of Surgery, Michigan State University, East Lansing.
Marc D Basson
Michigan State University · US

Funding

Schlafen mediation of intestinal differentiationR01DK096137 · NIDDK · UNIVERSITY OF NORTH DAKOTA · PI BASSON, MARC D. · 2014 to 2017
$1.5M
Regulation of FAK protein in mucosal healingR01DK067257 · NIDDK · WAYNE STATE UNIVERSITY · PI BASSON, MARC D. · 2005 to 2009
$1.2M
Schlafen mediation of intestinal adaptationR56DK096137 · NIDDK · MICHIGAN STATE UNIVERSITY · PI BASSON, MARC D. · 2012 to 2012
$217k
NIDDK NIH HHS 1 R56 DK096137-01NIDDK NIH HHS R01 DK067257NIDDK NIH HHS R01 DK096137NIDDK NIH HHS R56 DK096137
6 · The paper itself

Abstract

importanceThe normal absorptive function and structural maintenance of the intestinal mucosa depend on a constant process of proliferation of enterocytic stem cells followed by progressive differentiation toward a mature phenotype. The mechanisms that govern enterocytic differentiation in the mucosa of the small intestine are poorly understood.

objectiveTo determine whether schlafen 3 (but not other schlafen proteins) act in vivo and whether its effects are limited to the small intestine. We have previously demonstrated in nonmalignant rat intestinal IEC-6 cells that schlafen 3 levels correlate with the expression of various differentiation markers in vitro in response to differentiation stimuli.

designRandomized controlled experiment.

settingAnimal science laboratory.

participantsMale Sprague-Dawley rats 8 to 13 weeks old. MAIN OUTCOMES AND MEASURES: Messenger RNA (mRNA) from jejunal and colonic mucosa was isolated, and transcript levels of schlafen proteins 1, 2, 3, 4, 5, 13, and 14; sucrase isomaltase (SI); dipeptidyl peptidase 4 (Dpp4); glucose transporter type 2 (Glut2); and villin were measured by quantitative reverse transcriptase-polymerase chain reaction. We tested parallel variations in protein levels by Western blotting and Dpp4 enzyme activity.

resultsThe transcript level of schlafen 3 (Slfn3) correlated with the levels of the differentiation markers SI, Dpp4, Glut2, and villin. However, the expression of schlafen proteins 1, 2, 4, 5, 13, and 14 did not correlate with the expression of the differentiation markers. The mucosal mRNA levels of Slfn3, SI, Glut2, and Dpp4 were all substantially higher in the rat jejunum than in colonic mucosa by a mean (SE) factor of 51.0 (13.2) for 6 rats (P < .05), 599 (99) for 8 rats (P < .01), 12.5 (5.5) for 8 rats (P < .01), and 14.0 (3.9) for 8 rats (P < .01), respectively. In IEC-6 cells, infection with adenovirus-expressing GFP-tagged Slfn3 significantly increased Slfn3 expression and Dpp4-specific activity compared with GFP-expressing virus (in 6 rats; P < .05). CONCLUSIONS AND RELEVANCE: Taken together with our previous in vitro observations, the results suggest that small intestinal enterocytic epithelial differentiation in rats may be regulated by Slfn3 in vivo, as in vitro, and that these effects may be specific to the small intestinal enterocytic phenotype as opposed to that of the mature colonocyte. Slfn3 human orthologs may be targeted to stimulate intestinal differentiation in patients with short bowel syndrome.

Indexed as

AnimalsBiomarkersCell DifferentiationColonDipeptidyl Peptidase 4EnterocytesGlucose Transporter Type 2IleumJejunumMaleMicrofilament ProteinsProteinsRatsRats, Sprague-DawleyRNA, MessengerSucrase-Isomaltase ComplexBiomarkersDipeptidyl Peptidase 4Glucose Transporter Type 2Microfilament ProteinsProteinsRNA, MessengerSlfn4 protein, ratSucrase-Isomaltase Complexvillin

Identifiers

PMID24005468
PMCPMC4590985
OpenAlexW2012212533

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.