Evidence map›Paper›PMID 24004944›Full record

ArticleDevelopment (Cambridge, England)2013

The trithorax group proteins Kismet and ASH1 promote H3K36 dimethylation to counteract Polycomb group repression in Drosophila.

Kristel M Dorighi, John W Tamkun

Open access · greenAbstract read
In one paragraph

Article in Development (Cambridge, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 1 synthesis or guideline pooled it, 94 citations in OpenAlex.

  1. Pooled it
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  14. microPublication biology · 2024
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  17. Deletion of theInternational journal of molecular sciences · 2023
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4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Kristel M DorighiDepartment of Molecular Cell and Developmental Biology, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
John W Tamkun
University of California, Santa Cruz · US

Funding

Studies of Chromatin Remodeling FactorsR01GM049883 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI TAMKUN, JOHN W. · 1993 to 2013
$3.9M
Training Program/Molecular/Cell/Developmental BiologyT32GM008646 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI STROME, SUSAN · 1999 to 2018
$3.7M
NIGMS NIH HHS 5 T32 GM008646NIGMS NIH HHS GM49883NIGMS NIH HHS R01 GM049883NIGMS NIH HHS T32 GM008646
6 · The paper itself

Abstract

Members of the Polycomb group of repressors and trithorax group of activators maintain heritable states of transcription by modifying nucleosomal histones or remodeling chromatin. Although tremendous progress has been made toward defining the biochemical activities of Polycomb and trithorax group proteins, much remains to be learned about how they interact with each other and the general transcription machinery to maintain on or off states of gene expression. The trithorax group protein Kismet (KIS) is related to the SWI/SNF and CHD families of chromatin remodeling factors. KIS promotes transcription elongation, facilitates the binding of the trithorax group histone methyltransferases ASH1 and TRX to active genes, and counteracts repressive methylation of histone H3 on lysine 27 (H3K27) by Polycomb group proteins. Here, we sought to clarify the mechanism of action of KIS and how it interacts with ASH1 to antagonize H3K27 methylation in Drosophila. We present evidence that KIS promotes transcription elongation and counteracts Polycomb group repression via distinct mechanisms. A chemical inhibitor of transcription elongation, DRB, had no effect on ASH1 recruitment or H3K27 methylation. Conversely, loss of ASH1 function had no effect on transcription elongation. Mutations in kis cause a global reduction in the di- and tri-methylation of histone H3 on lysine 36 (H3K36) - modifications that antagonize H3K27 methylation in vitro. Furthermore, loss of ASH1 significantly decreases H3K36 dimethylation, providing further evidence that ASH1 is an H3K36 dimethylase in vivo. These and other findings suggest that KIS antagonizes Polycomb group repression by facilitating ASH1-dependent H3K36 dimethylation.

Indexed as

AnimalsChromatin Assembly and DisassemblyChromosomal Proteins, Non-HistoneDichlororibofuranosylbenzimidazoleDNA-Binding ProteinsDNA HelicasesDrosophilaDrosophila ProteinsHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesHomeodomain ProteinsMethylationNucleic Acid Synthesis InhibitorsPolycomb-Group ProteinsSalivary GlandsASH1 protein, DrosophilaChromosomal Proteins, Non-HistoneDichlororibofuranosylbenzimidazoleDNA-Binding ProteinsDNA HelicasesDrosophila ProteinsHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHistonesHomeodomain Proteinskis protein, DrosophilaNucleic Acid Synthesis InhibitorsPolycomb-Group ProteinsTranscription Factorstrx protein, DrosophilaChromatinHistone methylationPolycomb groupTranscriptionTrithorax group

Identifiers

PMID24004944
PMCPMC3787758
OpenAlexW2097424136

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.