Evidence map›Paper›PMID 24002920›Full record

ArticleJournal of lipid research2013

Mechanistic insights into isoform-dependent and species-specific regulation of bile salt export pump by farnesoid X receptor.

Xiulong Song, Yuan Chen, Leila Valanejad, Rajani Kaimal, Bingfang Yan, Matthew Stoner, Ruitang Deng

Abstract read
In one paragraph

Article in Journal of lipid research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. The Farnesoid X Receptor as a Master Regulator of Hepatotoxicity.International journal of molecular sciences · 2022
    Review
  5. Review
  6. Article
  7. Article
  8. AInternational journal of molecular sciences · 2020
    Article
  9. Article
  10. Article
  11. Dysregulation of ΔMolecular and cellular endocrinology · 2018
    Article
  12. Article
  13. Article
  14. [Role of farnesoid X receptor in rats with acute cholestatic hepatitis].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2016
    Article
  15. Article
  16. Nuclear bile acid signaling through the farnesoid X receptor.Cellular and molecular life sciences : CMLS · 2015
    Review
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xiulong SongDepartment of Biomedical and Pharmaceutical Sciences, Center for Pharmacogenomics and Molecular Therapy, University of Rhode Island, Kingston, RI 02881.
Yuan Chen
Leila Valanejad
Rajani Kaimal
Bingfang Yan
Matthew Stoner
Ruitang Deng

Funding

Training CoreP20GM103430 · NIGMS · UNIVERSITY OF RHODE ISLAND · PI Bongsup P Cho · 2012 to 2026
$63.6M
Signaling of the Pregnane X ReceptorR01GM061988 · NIGMS · UNIVERSITY OF RHODE ISLAND · PI DENG, RUITANG · 2000 to 2016
$3.0M
Crosstalk between estrogen and bile acid signaling pathwayR01DK087755 · NIDDK · UNIVERSITY OF RHODE ISLAND · PI DENG, RUITANG · 2010 to 2014
$1.4M
Molecular Toxicology of CarboxylesterasesR01ES007965 · NIEHS · UNIVERSITY OF RHODE ISLAND · PI YAN, BINGFANG · 2003 to 2006
$1.2M
NIDDK NIH HHS R01 DK-087755NIDDK NIH HHS R01 DK087755NIEHS NIH HHS R01 ES007965NIEHS NIH HHS R01 ES-07965NIGMS NIH HHS 8 P20 GM-103430-12NIGMS NIH HHS P20 GM103430NIGMS NIH HHS R01 GM061988NIGMS NIH HHS R01 GM-61988
6 · The paper itself

Abstract

Expression of bile salt export pump (BSEP) is regulated by the bile acid/farnesoid X receptor (FXR) signaling pathway. Two FXR isoforms, FXRα1 and FXRα2, are predominantly expressed in human liver. We previously showed that human BSEP was isoform-dependently regulated by FXR and diminished with altered expression of FXRα1 and FXRα2 in patients with hepatocellular carcinoma. In this study, we demonstrate that FXRα1 and FXRα2 regulate human BSEP through two distinct FXR responsive elements (FXRE): IR1a and IR1b. As the predominant regulator, FXRα2 potently transactivated human BSEP through IR1a, while FXRα1 weakly transactivated human BSEP through a newly identified IR1b. Relative expression of FXRα1 and FXRα2 affected human BSEP expression in vitro and in vivo. Electrophoretic mobility shift and chromatin immunoprecipitation assays confirmed the binding and recruitment of FXRα1 and FXRα2 to IR1b and IR1a. Sequence analysis concluded that IR1b was completely conserved among species, whereas IR1a exhibited apparent differences across species. Sequence variations in IR1a were responsible for the observed species difference in BSEP transactivation by FXRα1 and FXRα2. In conclusion, FXR regulates BSEP in an isoform-dependent and species-specific manner through two distinct FXREs, and alteration of relative FXR isoform expression may be a potential mechanism for FXR to precisely regulate human BSEP in response to various physiological and pathological conditions.

Indexed as

Transcriptional ActivationAnimalsATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily B, Member 11Base SequenceCell Line, TumorFemaleHumansInverted Repeat SequencesLigandsLiverMiceMutationProtein IsoformsProtein TransportRatsABCB11 protein, humanAbcb11 protein, mouseAbcb11 protein, ratATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily B, Member 11LigandsProtein IsoformsReceptor, Farnesoid X-ActivatedReceptors, Cytoplasmic and Nuclearbile acid transportercanalicular secretiongene transcription

Identifiers

PMID24002920
PMCPMC3793607

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.