Evidence map›Paper›PMID 24002751›Full record

ArticleMicrobiology (Reading, England)2013

Identification of extracellular surface-layer associated proteins in Lactobacillus acidophilus NCFM.

Brant Johnson, Kurt Selle, Sarah O'Flaherty, Yong Jun Goh, Todd Klaenhammer

Open access · greenAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
14.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 117 citations in OpenAlex.

  1. Article
  2. Secretome Profiling ofAntibiotics (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Article
  5. In Vitro Analysis of Probiotic Properties Related to the Adaptation ofInternational journal of molecular sciences · 2025
    Article
  6. Article
  7. The molecular architecture ofProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Microbiome research reports · 2022
    Article
  14. Frontiers in microbiology · 2022
    Article
  15. Molecular and Cellular Mechanisms Influenced by Postbiotics.International journal of molecular sciences · 2021
    Review
  16. mBio · 2021
    Article
  17. Article
  18. Article
  19. Review
  20. Functional role of surface layer proteins ofBioscience of microbiota, food and health · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Brant JohnsonDepartment of Microbiology, North Carolina State University, Raleigh, NC, USA.
Kurt SelleDepartment of Food, Bioprocessing and Nutrition Sciences, North Carolina State University, Raleigh, NC, USA.
Sarah O'FlahertyDepartment of Food, Bioprocessing and Nutrition Sciences, North Carolina State University, Raleigh, NC, USA.
Yong Jun GohDepartment of Food, Bioprocessing and Nutrition Sciences, North Carolina State University, Raleigh, NC, USA.
Todd KlaenhammerDepartment of Food, Bioprocessing and Nutrition Sciences, North Carolina State University, Raleigh, NC, USA.
North Carolina State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial surface (S-) layers are crystalline arrays of self-assembling, proteinaceous subunits called S-layer proteins (Slps), with molecular masses ranging from 40 to 200 kDa. The S-layer-forming bacterium Lactobacillus acidophilus NCFM expresses three major Slps: SlpA (46 kDa), SlpB (47 kDa) and SlpX (51 kDa). SlpA has a demonstrated role in adhesion to Caco-2 intestinal epithelial cells in vitro, and has been shown to modulate dendritic cell (DC) and T-cell functionalities with murine DCs. In this study, a modification of a standard lithium chloride S-layer extraction revealed 37 proteins were solubilized from the S-layer wash fraction. Of these, 30 have predicted cleavage sites for secretion, 24 are predicted to be extracellular, six are lipid-anchored, three have N-terminal hydrophobic membrane spanning regions and four are intracellular, potentially moonlighting proteins. Some of these proteins, designated S-layer associated proteins (SLAPs), may be loosely associated with or embedded within the bacterial S-layer complex. Lba-1029, a putative SLAP gene, was deleted from the chromosome of L. acidophilus. Phenotypic characterization of the deletion mutant demonstrated that the SLAP LBA1029 contributes to a pro-inflammatory TNF-α response from murine DCs. This study identified extracellular proteins and putative SLAPs of L. acidophilus NCFM using LC-MS/MS. SLAPs appear to impart important surface display features and immunological properties to microbes that are coated by S-layers.

Indexed as

AnimalsCells, CulturedChromatography, LiquidDendritic CellsLactobacillus acidophilusMass SpectrometryMembrane GlycoproteinsMiceTumor Necrosis Factor-alphaMembrane GlycoproteinsS-layer proteinsTumor Necrosis Factor-alpha

Identifiers

PMID24002751
PMCPMC3836491
OpenAlexW2004133333

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.