Evidence map›Paper›PMID 23994560›Full record

ArticleAnalytical biochemistry2013

Detection of endogenous MazF enzymatic activity in Staphylococcus aureus.

Julia J van Rensburg, Paul J Hergenrother

Abstract read
In one paragraph

Article in Analytical biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
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  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Julia J van RensburgDepartment of Microbiology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.
Paul J Hergenrother

Funding

Cellular and Molecular Biology Training GrantT32GM007283 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI MORRISSEY, JAMES H. · 1985 to 2011
$4.7M
COMBATING MULTI-DRUG RESISTANT BACTERIAR01GM068385 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI HERGENROTHER, PAUL · 2003 to 2010
$1.4M
NIGMS NIH HHS R01 GM068385NIGMS NIH HHS R01GM068385NIGMS NIH HHS T32 GM007283NIGMS NIH HHS T32GM007283
6 · The paper itself

Abstract

The mazEFSa toxin-antitoxin (TA) system is ubiquitous in clinical isolates of Staphylococcus aureus, yet its physiological role is unclear. MazFSa is a sequence-specific endoribonuclease that inhibits the growth of S. aureus and Escherichia coli on ectopic overexpression. MazFSa preferentially cleaves RNA at UACAU sites, which are overrepresented in genes encoding pathogenicity factors. The exploitation of the inherent toxicity of MazFSa by artificial toxin activation has been proposed as an antibacterial strategy; however, enzymatic activity of endogenous MazFSa has never been detected, and tools for such analyses are lacking. Here we detail methods for detection of the ribonuclease activity of MazFSa, including a continuous fluorometric assay and a gel-based cleavage assay. Importantly, these methods allowed for the first detection of endogenous MazFSa enzymatic activity in S. aureus lysate. These robust and sensitive assays provide a toolkit for the identification, analysis, and validation of stressors that induce MazF enzymatic activity and should assist in the discovery of artificial activators of the mazEFSa TA system.

Indexed as

Enzyme AssaysGene Expression Regulation, BacterialAntitoxinsBacterial ToxinsDNA-Binding ProteinsElectrophoresis, Polyacrylamide GelEndoribonucleasesEscherichia coliEscherichia coli ProteinsFluorescent DyesFluorometryPhosphorus RadioisotopesProtein IsoformsRecombinant Fusion ProteinsSensitivity and SpecificityStaphylococcus aureusAntitoxinsBacterial ToxinsDNA-Binding ProteinsEndoribonucleasesEscherichia coli ProteinsFluorescent DyesMazF protein, E coliPhosphorus RadioisotopesProtein IsoformsRecombinant Fusion ProteinsVirulence FactorsEnzyme assayMazF(Sa)RibonucleaseToxin–antitoxin

Identifiers

PMID23994560
PMCPMC3828647

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.