Evidence map›Paper›PMID 23993987›Full record

ArticleHuman immunology2013

Identification and validation of shrimp-tropomyosin specific CD4 T cell epitopes.

Eugene V Ravkov, Igor Y Pavlov, Thomas B Martins, Gerald J Gleich, Lori A Wagner, Harry R Hill, Julio C Delgado

Open access · greenAbstract read
In one paragraph

Article in Human immunology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Overcoming Shellfish Allergy: How Far Have We Come?International journal of molecular sciences · 2020
    Review
  9. Immunotherapy of Food Allergy: a Comprehensive Review.Clinical reviews in allergy & immunology · 2019
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Arginine kinase Pen m 2 as an important shrimp allergen recognized by TH2 cells.The Journal of allergy and clinical immunology · 2014
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Eugene V RavkovARUP Institute for Clinical and Experimental Pathology, Department of Pathology, University of Utah School of Medicine, Salt Lake City, UT 84108, United States. Electronic address: eugene.v.ravkov@aruplab.com.
Igor Y Pavlov
Thomas B Martins
Gerald J Gleich
Lori A Wagner
Harry R Hill
Julio C Delgado
University of Utah · US

Funding

Identification and validation of HLA class II T cell epitopes in shrimp allergyR21AI088589 · NIAID · UNIVERSITY OF UTAH · PI DELGADO, JULIO CESAR · 2010 to 2011
$410k
NIAID NIH HHS AI088589NIAID NIH HHS R21 AI088589
6 · The paper itself

Abstract

backgroundShellfish allergy is an immune-mediated adverse reaction to allergenic shellfish and is responsible for significant morbidity and mortality. CD4 T cell responses play an important role in the pathophysiological mechanisms of sensitization and in production of IgE.

objectiveWe sought to identify and validate CD4 T cell shrimp tropomyosin-derived epitopes and characterize CD4 T cell responses in subjects with a clinical history of shellfish allergy.

methodUsing an in vitro MHC-peptide binding assay, we screened 91 overlapping peptides and identified 28 epitopes with moderate and strong binding capacities; 3 additional peptides were included based on MHC binding prediction score. These peptides were then examined in proliferation and cytokine release assays with T cells from allergic subjects.

result17 epitopes restricted to DRB(∗)01:01, DRB1(∗)03:01, DRB1(∗)04:01, DRB1(∗)09:01, DQB1(∗)02:01, DQB1(∗)03:02 and DQB1(∗)05:01 alleles were identified and validated by both the MHC binding and the functional assays. Two peptides showed specificities to more than one MHC class II allele. We demonstrated that these peptides exert functional responses in an epitope specific manner, eliciting predominantly IL-6 and IL-13.

conclusionThe identified epitopes are specific to common MHC class II alleles in the general population. Our study provides important data for the design of peptide-based immunotherapy of shrimp-allergic patients.

Indexed as

AllergensAmino Acid SequenceAnimalsCase-Control StudiesCD4-Positive T-LymphocytesCytokinesEpitope MappingEpitopes, T-LymphocyteFood HypersensitivityHLA AntigensHumansLymphocyte ActivationMolecular Sequence DataOligopeptidesPenaeidaeProtein BindingAllergensCytokinesEpitopes, T-LymphocyteHLA AntigensMHC binding peptideOligopeptidesTropomyosinmean fluorescence intensityMFI

Identifiers

PMID23993987
PMCPMC3870591
OpenAlexW2011122895

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.