Evidence map›Paper›PMID 23991055›Full record

ArticlePloS one2013

High-levels of acquired drug resistance in adult patients failing first-line antiretroviral therapy in a rural HIV treatment programme in KwaZulu-Natal, South Africa.

Justen Manasa, Richard J Lessells, Andrew Skingsley, Kevindra K Naidu, Marie-Louise Newell, Nuala McGrath, Tulio de Oliveira, Southern African Treatment and Resistance Network

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 61 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Observational
  11. Article
  12. Article
  13. Article
  14. Article
  15. Observational
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Justen ManasaAfrica Centre for Health and Population Studies, University of KwaZulu-Natal, Somkhele, South Africa.
Richard J Lessells
Andrew Skingsley
Kevindra K Naidu
Marie-Louise Newell
Nuala McGrath
Tulio de Oliveira
Southern African Treatment and Resistance Network
University of KwaZulu-Natal · ZAAfrica Health Research Institute · ZA

Funding

PHS HHS 082384/Z/07/ZWellcome Trust 090999Wellcome Trust 097410Wellcome Trust 100714
6 · The paper itself

Abstract

objectiveTo determine the frequency and patterns of acquired antiretroviral drug resistance in a rural primary health care programme in South Africa.

designCross-sectional study nested within HIV treatment programme.

methodsAdult (≥ 18 years) HIV-infected individuals initially treated with a first-line stavudine- or zidovudine-based antiretroviral therapy (ART) regimen and with evidence of virological failure (one viral load >1000 copies/ml) were enrolled from 17 rural primary health care clinics. Genotypic resistance testing was performed using the in-house SATuRN/Life Technologies system. Sequences were analysed and genotypic susceptibility scores (GSS) for standard second-line regimens were calculated using the Stanford HIVDB 6.0.5 algorithms.

resultsA total of 222 adults were successfully genotyped for HIV drug resistance between December 2010 and March 2012. The most common regimens at time of genotype were stavudine, lamivudine and efavirenz (51%); and stavudine, lamivudine and nevirapine (24%). Median duration of ART was 42 months (interquartile range (IQR) 32-53) and median duration of antiretroviral failure was 27 months (IQR 17-40). One hundred and ninety one (86%) had at least one drug resistance mutation. For 34 individuals (15%), the GSS for the standard second-line regimen was <2, suggesting a significantly compromised regimen. In univariate analysis, individuals with a prior nucleoside reverse-transcriptase inhibitor (NRTI) substitution were more likely to have a GSS <2 than those on the same NRTIs throughout (odds ratio (OR) 5.70, 95% confidence interval (CI) 2.60-12.49).

conclusionsThere are high levels of drug resistance in adults with failure of first-line antiretroviral therapy in this rural primary health care programme. Standard second-line regimens could potentially have had reduced efficacy in about one in seven adults involved.

Indexed as

AdolescentAdultAlkynesAnalysis of VarianceAnti-HIV AgentsBenzoxazinesCross-Sectional StudiesCyclopropanesDrug Resistance, ViralDrug Therapy, CombinationFemaleGenotypeHIV-1HIV InfectionsHumansLamivudineAlkynesAnti-HIV AgentsBenzoxazinesCyclopropanesefavirenzLamivudineNevirapineStavudineZidovudine

Identifiers

PMID23991055
PMCPMC3749184
OpenAlexW2149010989

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.