Evidence map›Paper›PMID 23988088›Full record

ArticleBiochemistry2013

Localized permeabilization of E. coli membranes by the antimicrobial peptide Cecropin A.

Nambirajan Rangarajan, Somenath Bakshi, James C Weisshaar

Abstract read
In one paragraph

Article in Biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 90 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
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  6. Review
  7. Article
  8. Article
  9. Time-resolved cell-to-cell heterogeneity ofFrontiers in bioengineering and biotechnology · 2024
    Article
  10. Article
  11. Cells · 2022
    Article
  12. Article
  13. Real-Time Fluorescence Microscopy on LivingInternational journal of molecular sciences · 2022
    Article
  14. Article
  15. Article
  16. ACS infectious diseases · 2021
    Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Nambirajan RangarajanDepartment of Chemistry and ‡Molecular Biophysics Program, University of Wisconsin-Madison , 1101 University Avenue, Madison, Wisconsin 53706, United States.
Somenath Bakshi
James C Weisshaar
University of Wisconsin–Madison · US

Funding

Dynamics of Antimicrobial Peptide Interactions with Bacterial MembranesR01GM094510 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI WEISSHAAR, JAMES C. · 2010 to 2018
$2.2M
NIGMS NIH HHS R01 GM094510NIGMS NIH HHS R01GM094510
6 · The paper itself

Abstract

Fluorescence microscopy enables detailed observation of the effects of the antimicrobial peptide Cecropin A on the outer membrane (OM) and cytoplasmic membrane (CM) of single E. coli cells with subsecond time resolution. Fluorescence from periplasmic GFP decays and cell growth halts when the OM is permeabilized. Fluorescence from the DNA stain Sytox Green rises when the CM is permeabilized and the stain enters the cytoplasm. The initial membrane disruptions are localized and stable. Septating cells are attacked earlier than nonseptating cells, and curved membrane surfaces are attacked in preference to cylindrical surfaces. Below a threshold bulk Cecropin A concentration, permeabilization is not observed over 30 min. Above this threshold, we observe a lag time of several minutes between Cecropin A addition and OM permeabilization and ∼30 s between OM and CM permeabilization. The long lag times and the existence of a threshold concentration for permeabilization suggest a nucleation mechanism. However, the roughly linear dependence of mean lag time on bulk peptide concentration is not easily reconciled with a nucleation step involving simultaneous insertion of multiple peptides into the bilayer. Monte Carlo simulations suggest that within seconds, the OM permeability becomes comparable to that of a pore of 100 nm diameter or of numerous small pores distributed over a similarly large area.

Indexed as

Anti-Infective AgentsAntimicrobial Cationic PeptidesCell MembraneCell Membrane PermeabilityEscherichia coli K12Green Fluorescent ProteinsMicroscopy, FluorescenceMonte Carlo MethodAnti-Infective AgentsAntimicrobial Cationic Peptidescecropin AGreen Fluorescent Proteins

Identifiers

PMID23988088
PMCPMC3813965
OpenAlexW2089065960

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.