Evidence map›Paper›PMID 23986476›Full record

ArticleJournal of cell science2013

SNX15 links clathrin endocytosis to the PtdIns3P early endosome independently of the APPL1 endosome.

Chris Danson, Edward Brown, Oliver J Hemmings, Ian J McGough, Sam Yarwood, Kate J Heesom, Jeremy G Carlton, Juan Martin-Serrano, Margaret T May, Paul Verkade and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of cell science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. IST1 regulates select recycling pathways.Traffic (Copenhagen, Denmark) · 2024
    Article
  6. Review
  7. Article
  8. Phosphoinositide Recognition Sites Are Blocked by Metabolite Attachment.Frontiers in cell and developmental biology · 2021
    Article
  9. Membrane Heterogeneity Controls Cellular Endocytic Trafficking.Frontiers in cell and developmental biology · 2020
    Review
  10. Article
  11. Article
  12. The emerging role of sorting nexins in cardiovascular diseases.Clinical science (London, England : 1979) · 2019
    Review
  13. Article
  14. Amyloid precursor protein and endosomal-lysosomal dysfunction in Alzheimer's disease: inseparable partners in a multifactorial disease.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2017
    Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Chris DansonThe Henry Wellcome Integrated Signalling Laboratories, School of Biochemistry, Medical Sciences Building, University of Bristol, Bristol BS8 1TD, UK.
Edward Brown
Oliver J Hemmings
Ian J McGough
Sam Yarwood
Kate J Heesom
Jeremy G Carlton
Juan Martin-Serrano
Margaret T May
Paul Verkade
Peter J Cullen
University of Bristol · GBKing's College London · GB

Funding

Biotechnology and Biological Sciences Research Council BB/I011412/1Medical Research Council G0802777Wellcome TrustWellcome Trust 086777/Z/08/ZWellcome Trust 089928/Z/09/Z
6 · The paper itself

Abstract

Sorting nexins (SNXs) are key regulators of the endosomal network. In designing an RNAi-mediated loss-of-function screen, we establish that of 30 human SNXs only SNX3, SNX5, SNX9, SNX15 and SNX21 appear to regulate EGF receptor degradative sorting. Suppression of SNX15 results in a delay in receptor degradation arising from a defect in movement of newly internalised EGF-receptor-labelled vesicles into early endosomes. Besides a phosphatidylinositol 3-phosphate- and PX-domain-dependent association to early endosomes, SNX15 also associates with clathrin-coated pits and clathrin-coated vesicles by direct binding to clathrin through a non-canonical clathrin-binding box. From live-cell imaging, it was identified that the activated EGF receptor enters distinct sub-populations of SNX15- and APPL1-labelled peripheral endocytic vesicles, which do not undergo heterotypic fusion. The SNX15-decorated receptor-containing sub-population does, however, undergo direct fusion with the Rab5-labelled early endosome. Our data are consistent with a model in which the EGF receptor enters the early endosome following clathrin-mediated endocytosis through at least two parallel pathways: maturation through an APPL1-intermediate compartment and an alternative more direct fusion between SNX15-decorated endocytic vesicles and the Rab5-positive early endosome.

Indexed as

EndocytosisAdaptor Proteins, Signal TransducingClathrinClathrin-Coated VesiclesEndosomesErbB ReceptorsHeLa CellsHumansPhosphatidylinositol PhosphatesProtein TransportSorting NexinsAdaptor Proteins, Signal TransducingAPPL1 protein, humanClathrinErbB Receptorsphosphatidylinositol 3-phosphatePhosphatidylinositol PhosphatesSNX15 protein, humanSorting NexinsAPPL1ClathrinEndosomePhosphoinositideSorting nexin

Identifiers

PMID23986476
PMCPMC3820240
OpenAlexW2040849582

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.