Evidence map›Paper›PMID 23986444›Full record

ArticleThe Journal of biological chemistry2013

Heterogeneous seeding of a prion structure by a generic amyloid form of the fungal prion-forming domain HET-s(218-289).

William Wan, Wen Bian, Michele McDonald, Aleksandra Kijac, David E Wemmer, Gerald Stubbs

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Cryo-Electron Tomography of Reconstituted Biomolecular Condensates.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  2. Review
  3. Article
  4. Structural Biology of PrP Prions.Cold Spring Harbor perspectives in medicine · 2017
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Fungal prion HET-s as a model for structural complexity and self-propagation in prions.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

William WanFrom the Department of Biological Sciences and Center for Structural Biology, Vanderbilt University, Nashville, Tennessee 37235-1634.
Wen Bian
Michele McDonald
Aleksandra Kijac
David E Wemmer
Gerald Stubbs

Funding

VIRAL DEGENERATIVE DEMENTING DISEASE IN AGING (SUPP)P01AG002132 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SCHNIER, PAUL · 1985 to 2024
$51.7M
MOLECULAR BIOPHYSICS TRAINING PROGRAM AT VANDERBILTT32GM008320 · NIGMS · VANDERBILT UNIVERSITY · PI CHAZIN, WALTER J. · 1989 to 2023
$7.9M
BioCARS: A Synchrotron Structure Biology ResourceR24GM111072 · NIGMS · UNIVERSITY OF CHICAGO · PI MOFFAT, JOHN KEITH · 2013 to 2016
$2.3M
BioCARS: A Synchroton Structural Biology ResourceP41GM103543 · NIGMS · UNIVERSITY OF CHICAGO · PI MOFFAT, JOHN KEITH · 2012 to 2012
$1.1M
Structure and assembly of the fungal prion HET-sF31AG040947 · NIA · VANDERBILT UNIVERSITY · PI WAN, WILLIAM N · 2011 to 2013
$68k
NIA NIH HHS AG002132NIA NIH HHS F31 AG040947NIA NIH HHS F31-AG040947NIA NIH HHS P01 AG002132NIGMS NIH HHS P41 GM103543NIGMS NIH HHS R24 GM111072NIGMS NIH HHS T32 GM008320
6 · The paper itself

Abstract

The fungal prion-forming domain HET-s(218-289) forms infectious amyloid fibrils at physiological pH that were shown by solid-state NMR to be assemblies of a two-rung β-solenoid structure. Under acidic conditions, HET-s(218-289) has been shown to form amyloid fibrils that have very low infectivity in vivo, but structural information about these fibrils has been very limited. We show by x-ray fiber diffraction that the HET-s(218-289) fibrils formed under acidic conditions have a stacked β-sheet architecture commonly found in short amyloidogenic peptides and denatured protein aggregates. At physiological pH, stacked β-sheet fibrils nucleate the formation of the infectious β-solenoid prions in a process of heterogeneous seeding, but do so with kinetic profiles distinct from those of spontaneous or homogeneous (seeded with infectious β-solenoid fibrils) fibrillization. Several serial passages of stacked β-sheet-seeded solutions lead to fibrillization kinetics similar to homogeneously seeded solutions. Our results directly show that structural mutation can occur between substantially different amyloid architectures, lending credence to the suggestion that the processes of strain adaptation and crossing species barriers are facilitated by structural mutation.

Indexed as

AmyloidFungal ProteinsMagnetic Resonance SpectroscopyModels, MolecularPeptidesPodosporaPrionsProtein FoldingProtein Structure, SecondaryProtein Structure, TertiaryRecombinant ProteinsX-Ray DiffractionAmyloidFungal ProteinsHET-S protein, Podospora anserinaPeptidesPrionsRecombinant ProteinsAmyloidFiber DiffractionPrionsPrion TransmissionProtein AggregationSeedingSelf-propagationStructural Biology

Identifiers

PMID23986444
PMCPMC3795258

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.