Evidence map›Paper›PMID 23983122›Full record

ArticleThe Journal of biological chemistry2013

Remodeling of membrane lipids in iron-starved Chlamydomonas.

Eugen I Urzica, Astrid Vieler, Anne Hong-Hermesdorf, M Dudley Page, David Casero, Sean D Gallaher, Janette Kropat, Matteo Pellegrini, Christoph Benning, Sabeeha S Merchant

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 92 citations in OpenAlex.

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  11. Enhanced Lipid Production inFrontiers in plant science · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Eugen I UrzicaFrom the Department of Chemistry and Biochemistry,. Electronic address: eugen.urzica@uni-muenster.de.
Astrid Vielerthe Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824.
Anne Hong-HermesdorfFrom the Department of Chemistry and Biochemistry.
M Dudley PageFrom the Department of Chemistry and Biochemistry.
David Caserothe Institute of Genomics and Proteomics, and; the Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, California 90095 and.
Sean D GallaherFrom the Department of Chemistry and Biochemistry.
Janette KropatFrom the Department of Chemistry and Biochemistry.
Matteo Pellegrinithe Institute of Genomics and Proteomics, and; the Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, California 90095 and.
Christoph Benningthe Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824.
Sabeeha S MerchantFrom the Department of Chemistry and Biochemistry,; the Institute of Genomics and Proteomics, and; the Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, California 90095 and. Electronic address: sabeeha@chem.ucla.edu.
Michigan State University · USUniversity of California, Los Angeles · USGenomics (United Kingdom) · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chlamydomonas reinhardtii cells exposed to abiotic stresses (e.g. nitrogen, zinc, or phosphorus deficiency) accumulate triacylglycerols (TAG), which are stored in lipid droplets. Here, we report that iron starvation leads to formation of lipid droplets and accumulation of TAGs. This occurs between 12 and 24 h after the switch to iron-starvation medium. C. reinhardtii cells deprived of iron have more saturated fatty acid (FA), possibly due to the loss of function of FA desaturases, which are iron-requiring enzymes with diiron centers. The abundance of a plastid acyl-ACP desaturase (FAB2) is decreased to the same degree as ferredoxin. Ferredoxin is a substrate of the desaturases and has been previously shown to be a major target of the iron deficiency response. The increase in saturated FA (C16:0 and C18:0) is concomitant with the decrease in unsaturated FA (C16:4, C18:3, or C18:4). This change was gradual for diacylglyceryl-N,N,N-trimethylhomoserine (DGTS) and digalactosyldiacylglycerol (DGDG), whereas the monogalactosyldiacylglycerol (MGDG) FA profile remained stable during the first 12 h, whereas MGDG levels were decreasing over the same period of time. These changes were detectable after only 2 h of iron starvation. On the other hand, DGTS and DGDG contents gradually decreased until a minimum was reached after 24-48 h. RNA-Seq analysis of iron-starved C. reinhardtii cells revealed notable changes in many transcripts coding for enzymes involved in FA metabolism. The mRNA abundances of genes coding for components involved in TAG accumulation (diacylglycerol acyltransferases or major lipid droplet protein) were increased. A more dramatic increase at the transcript level has been observed for many lipases, suggesting that major remodeling of lipid membranes occurs during iron starvation in C. reinhardtii.

Indexed as

Chlamydomonas reinhardtiiChloroplast ProteinsDiacylglycerol O-AcyltransferaseFatty Acid DesaturasesIronLipaseMembrane LipidsTime FactorsChloroplast ProteinsDiacylglycerol O-AcyltransferaseFatty Acid DesaturasesIronLipaseMembrane LipidsAlgaeFatty Acid DesaturaseIronLipid MetabolismPlant BiochemistryTriacylglycerol

Identifiers

PMID23983122
PMCPMC3798491
OpenAlexW1967481978

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.