Evidence map›Paper›PMID 23982189›Full record

ArticleAmerican journal of epidemiology2013

Association of polymorphisms in natural killer cell-related genes with preterm birth.

Quaker E Harmon, Stephanie M Engel, Andrew F Olshan, Thomas Moran, Alison M Stuebe, Jingchun Luo, Michael C Wu, Christy L Avery

Open access · bronzeAbstract read
In one paragraph

Article in American journal of epidemiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. The Role of Genetics in Preterm Birth.Reproductive sciences (Thousand Oaks, Calif.) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Quaker E Harmon
Stephanie M Engel
Andrew F Olshan
Thomas Moran
Alison M Stuebe
Jingchun Luo
Michael C Wu
Christy L Avery
National Institutes of Health · US

Funding

Zonisamide in Patients with Neuropathic Pain Associated with Diabetic NeuropathyM01RR000046 · NCRR · UNIV OF NORTH CAROLINA CHAPEL HILL · PI JOY, MELANIE S · 1985 to 2008
$38.5M
UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
Biostatstics for Research in Environmental HealthT32ES007018 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Stephanie Engel, Rebecca Fry · 1985 to 2026
$31.3M
Carolina Population CenterR24HD050924 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MORGAN, SAMUEL PHILIP · 2005 to 2014
$10.0M
Placental Vascular Compromise and Preterm DeliveryR01HD039373 · NICHD · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI THORP, JOHN M · 2001 to 2005
$3.5M
EPIDEMIOLOGY OF EXERTION, STRESS, AND PRETERM DELIVERYR01HD037584 · NICHD · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI SAVITZ, DAVID A · 2000 to 2004
$3.1M
IRON, ZINC AND FOLATE AND PRETERM DELIVERYR01HD028684 · NICHD · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI SAVITZ, DAVID A · 1995 to 2001
$1.1M
Maternal Genetic Variation and Risk of Adverse Pregnancy OutcomesR21HD060207 · NICHD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ENGEL, STEPHANIE · 2009 to 2010
$440k
NCRR NIH HHS M01 RR000046NCRR NIH HHS RR00046NICHD NIH HHS HD28684NICHD NIH HHS HD28684ANICHD NIH HHS HD37584NICHD NIH HHS HD39373NICHD NIH HHS R01 HD037584NICHD NIH HHS R01 HD039373NICHD NIH HHS R21 HD060207NICHD NIH HHS R24 HD050924NIEHS NIH HHS 2-T32-ES07018NIEHS NIH HHS P30 ES010126NIEHS NIH HHS P30ES010126NIEHS NIH HHS T32 ES007018
6 · The paper itself

Abstract

Inflammation is implicated in preterm birth, but genetic studies of inflammatory genes have yielded inconsistent results. Maternal DNA from 1,646 participants in the Pregnancy, Infection, and Nutrition Cohort, enrolled in Orange and Wake counties, North Carolina (1995-2005), were genotyped for 432 tag single-nucleotide polymorphisms (SNPs) in 30 candidate genes. Gene-level and SNP associations were modeled within strata of genetic ancestry. Six genes were associated with preterm birth among European Americans: interleukin 12A (IL12A); colony-stimulating factor 2 (CSF2); interferon γ receptor 2 (IFNGR2); killer cell immunoglobulin-like receptor, three domain, long cytoplasmic tail, 2 (KIR3DL2); interleukin 4 (IL4); and interleukin 13 (IL13). Of these, relatively strong single-SNP associations were seen in IFNGR2 and KIR3DL2. Among the 4 genes related to natural killer cell function, 2 (IL12A and CSF2) were consistently associated with reduced risk of prematurity for both European and African Americans. SNPs tagging a locus control region for IL4 and IL13 were associated with an increased risk of spontaneous preterm birth for European Americans (rs3091307; risk ratio = 1.9; 95% confidence interval: 1.4, 2.5). Although gene-level associations were detected only in European Americans, single-SNP associations among European and African Americans were often similar in direction, though estimated with less precision among African Americans. In conclusion, we identified novel associations between variants in the natural killer cell immune pathway and prematurity in this biracial US population.

Indexed as

Killer Cells, NaturalPolymorphism, Single NucleotideBlack or African AmericanCase-Control StudiesColony-Stimulating FactorsFemaleGenetic Association StudiesGenotyping TechniquesHumansInterleukinsLinkage DisequilibriumPregnancyPremature BirthReceptors, InterferonReceptors, KIR3DL2T-LymphocytesColony-Stimulating FactorsIFNGR2 protein, humanInterleukinsKIR3DL2 protein, humanReceptors, InterferonReceptors, KIR3DL2African Americans; European Continental Ancestry Group; geneticsgenetic association studiesinflammationnatural killer cellspremature birth

Identifiers

PMID23982189
PMCPMC3792727
OpenAlexW2104250249

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.