Evidence map›Paper›PMID 23981442›Full record

ArticleAlcohol (Fayetteville, N.Y.)2013

Stress-response pathways are altered in the hippocampus of chronic alcoholics.

Jeanette N McClintick, Xiaoling Xuei, Jay A Tischfield, Alison Goate, Tatiana Foroud, Leah Wetherill, Marissa A Ehringer, Howard J Edenberg

Open access · greenAbstract read
In one paragraph

Article in Alcohol (Fayetteville, N.Y.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed, 5 pooled it
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 5 syntheses or guidelines pooled it, 112 citations in OpenAlex.

  1. Pooled it
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  6. Article
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  10. Functional Validation of Alcohol Dependence-AssociatedInternational journal of stem cells · 2025
    Article
  11. Article
  12. Long-Term Excessive Alcohol Consumption Enhances Myelination in the Mouse Nucleus Accumbens.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Phenome-wide association studies betweenFrontiers in psychiatry · 2024
    Article
  18. Article
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  20. Article

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Jeanette N McClintickDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Xiaoling Xuei
Jay A Tischfield
Alison Goate
Tatiana Foroud
Leah Wetherill
Marissa A Ehringer
Howard J Edenberg
Indiana University School of MedicineIndiana University – Purdue University Indianapolis · USRutgers, The State University of New Jersey · USUniversity of Colorado Boulder · USWashington University in St. Louis · US

Funding

Subject CollectionU10AA008401 · NIAAA · SUNY DOWNSTATE MEDICAL CENTER · PI Jacquelyn Leigh Meyers · 1989 to 2026
$162.7M
Brain Tissue Resource Centre for Alcohol ResearchR28AA012725 · NIAAA · UNIVERSITY OF SYDNEY · PI Greg Trevor Sutherland · 2012 to 2026
$7.0M
Brain Tissue Resource Centre for Alcohol ResearchR01AA012725 · NIAAA · UNIVERSITY OF SYDNEY · PI HARPER, CLIVE G · 2002 to 2007
$1.8M
NIAAA NIH HHS R01 AA012725NIAAA NIH HHS R01 AA12725NIAAA NIH HHS R28 AA012725NIAAA NIH HHS U10 AA008401NIAAA NIH HHS U10AA008401
6 · The paper itself

Abstract

The chronic high-level alcohol consumption seen in alcoholism leads to dramatic effects on the hippocampus, including decreased white matter, loss of oligodendrocytes and other glial cells, and inhibition of neurogenesis. Examining gene expression in post mortem hippocampal tissue from 20 alcoholics and 19 controls allowed us to detect differentially expressed genes that may play a role in the risk for alcoholism or whose expression is modified by chronic consumption of alcohol. We identified 639 named genes whose expression significantly differed between alcoholics and controls at a False Discovery Rate (FDR) ≤ 0.20; 52% of these genes differed by at least 1.2-fold. Differentially expressed genes included the glucocorticoid receptor and the related gene FK506 binding protein 5 (FKBP5), UDP glycosyltransferase 8 (UGT8), urea transporter (SLC14A1), zinc transporter (SLC39A10), Interleukin 1 receptor type 1 (IL1R1), thioredoxin interacting protein (TXNIP), and many metallothioneins. Pathways related to inflammation, hypoxia, and stress showed activation, and pathways that play roles in neurogenesis and myelination showed decreases. The cortisol pathway dysregulation and increased inflammation identified here are seen in other stress-related conditions such as depression and post-traumatic stress disorder and most likely play a role in addiction. Many of the detrimental effects on the hippocampus appear to be mediated through NF-κB signaling. Twenty-four of the differentially regulated genes were previously identified by genome-wide association studies of alcohol use disorders; this raises the potential interest of genes not normally associated with alcoholism, such as suppression of tumorigenicity 18 (ST18), BCL2-associated athanogene 3 (BAG3), and von Willebrand factor (VWF).

Indexed as

TranscriptomeAdultAgedAlcoholicsAlcoholismFemaleGene OntologyHippocampusHumansHypoxiaInflammationMaleMiddle AgedNeurogenesisNF-kappa BNF-kappa BAlcoholismCortisolGene expressionGWASHippocampusInflammationNF-κBStress

Identifiers

PMID23981442
PMCPMC3836826
OpenAlexW2157152722

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.