ArticleG3 (Bethesda, Md.)2013
A whole-genome DNA marker map for cotton based on the D-genome sequence of Gossypium raimondii L.
Article in G3 (Bethesda, Md.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 20 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
20 citing papers in PubMed, 41 citations in OpenAlex.
- Molecular dissection of quantitative variation in fiber elongation betweenFrontiers in plant science · 2025Article
- ThePlant physiology · 2020Article
- Article
- Chromosome structural variation of two cultivated tetraploid cottons and their ancestral diploid species based on a new high-density genetic map.Scientific reports · 2017Article
- Cytogenetic maps of homoeologous chromosomes AComparative cytogenetics · 2017Article
- Insights Into Upland Cotton (Genomics insights · 2017Article
- A Genetic Map Between Gossypium hirsutum and the Brazilian Endemic G. mustelinum and Its Application to QTL Mapping.G3 (Bethesda, Md.) · 2016Article
- A high density genetic map and QTL for agronomic and yield traits in Foxtail millet [Setaria italica (L.) P. Beauv].BMC genomics · 2016Article
- A Gossypium BAC clone contains key repeat components distinguishing sub-genome of allotetraploidy cottons.Molecular cytogenetics · 2016Article
- Development of Gossypium anomalum-derived microsatellite markers and their use for genome-wide identification of recombination between the G. anomalum and G. hirsutum genomes.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015Article
- Genome-wide mining, characterization, and development of microsatellite markers in gossypium species.Scientific reports · 2015Article
- Sequence-based ultra-dense genetic and physical maps reveal structural variations of allopolyploid cotton genomes.Genome biology · 2015Article
- Molecular characterization of the Gossypium Diversity Reference Set of the US National Cotton Germplasm Collection.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015Article
- Sequence composition of BAC clones and SSR markers mapped to Upland cotton chromosomes 11 and 21 targeting resistance to soil-borne pathogens.Frontiers in plant science · 2015Article
- Construction of cytogenetic map of Gossypium herbaceum chromosome 1 and its integration with genetic maps.Molecular cytogenetics · 2015Article
- Inheritance and QTL Mapping of Leaf Nutrient Concentration in a Cotton Inter-Specific Derived RIL Population.PloS one · 2015Article
- Mapping genomic loci for cotton plant architecture, yield components, and fiber properties in an interspecific (Gossypium hirsutum L. × G. barbadense L.) RIL population.Molecular genetics and genomics : MGG · 2014Article
- Next generation genetic mapping of the Ligon-lintless-2 (Li₂) locus in upland cotton (Gossypium hirsutum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014Article
- Transcriptome and complexity-reduced, DNA-based identification of intraspecies single-nucleotide polymorphisms in the polyploid Gossypium hirsutum L.G3 (Bethesda, Md.) · 2014Article
- Quantitative trait loci analysis of fiber quality traits using a random-mated recombinant inbred population in Upland cotton (Gossypium hirsutum L.).BMC genomics · 2014Article
Corrections and comments
- Erratum issued
Authors and funding
6 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We constructed a very-high-density, whole-genome marker map (WGMM) for cotton by using 18,597 DNA markers corresponding to 48,958 loci that were aligned to both a consensus genetic map and a reference genome sequence. The WGMM has a density of one locus per 15.6 kb, or an average of 1.3 loci per gene. The WGMM was anchored by the use of colinear markers to a detailed genetic map, providing recombinational information. Mapped markers occurred at relatively greater physical densities in distal chromosomal regions and lower physical densities in the central regions, with all 1 Mb bins having at least nine markers. Hotspots for quantitative trait loci and resistance gene analog clusters were aligned to the map and DNA markers identified for targeting of these regions of high practical importance. Based on the cotton D genome reference sequence, the locations of chromosome structural rearrangements plotted on the map facilitate its translation to other Gossypium genome types. The WGMM is a versatile genetic map for marker assisted breeding, fine mapping and cloning of genes and quantitative trait loci, developing new genetic markers and maps, genome-wide association mapping, and genome evolution studies.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.