Evidence map›Paper›PMID 23979561›Full record

ArticleArchives of microbiology2013

Genes from the exo-xis region of λ and Shiga toxin-converting bacteriophages influence lysogenization and prophage induction.

Sylwia Bloch, Bożena Nejman-Faleńczyk, Joanna M Łoś, Sylwia Barańska, Krzysztof Łepek, Agnieszka Felczykowska, Marcin Łoś, Grzegorz Węgrzyn, Alicja Węgrzyn

Abstract read
In one paragraph

Article in Archives of microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Characterization of the Bacteriophage vB_EfaS-271 InfectingInternational journal of molecular sciences · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Roles ofViruses · 2018
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sylwia BlochDepartment of Molecular Biology, University of Gdańsk, Wita Stwosza 59, 80-308, Gdańsk, Poland.
Bożena Nejman-Faleńczyk
Joanna M Łoś
Sylwia Barańska
Krzysztof Łepek
Agnieszka Felczykowska
Marcin Łoś
Grzegorz Węgrzyn
Alicja Węgrzyn

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The exo-xis region, present in genomes of lambdoid bacteriophages, contains highly conserved genes of largely unknown functions. In this report, using bacteriophage λ and Shiga toxin-converting bacteriophage ϕ24Β, we demonstrate that the presence of this region on a multicopy plasmid results in impaired lysogenization of Escherichia coli and delayed, while more effective, induction of prophages following stimulation by various agents (mitomycin C, hydrogen peroxide, UV irradiation). Spontaneous induction of λ and ϕ24Β prophages was also more efficient in bacteria carrying additional copies of the corresponding exo-xis region on plasmids. No significant effects of an increased copy number of genes located between exo and xis on both efficiency of adsorption on the host cells and lytic development inside the host cell of these bacteriophages were found. We conclude that genes from the exo-xis region of lambdoid bacteriophages participate in the regulation of lysogenization and prophage maintenance.

Indexed as

Virus ActivationAmino Acid SequenceBacteriophage lambdaMolecular Sequence DataPlasmidsProphagesSequence AlignmentShiga-Toxigenic Escherichia coliShiga ToxinShiga Toxin

Identifiers

PMID23979561
PMCPMC3824215

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.