ArticleMicrobes and environments2013
Effects of plant genotype and nitrogen level on bacterial communities in rice shoots and roots.
Article in Microbes and environments, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
19 citing papers in PubMed.
- Culturable endophytic bacteria associated with zinc accumulation difference in rice genotypes.World journal of microbiology & biotechnology · 2026Article
- Land Cover and Seasonal Variations Shape Soil Microbial Communities and Nutrient Cycling in Madagascar Tropical Forests.Microbial ecology · 2025Article
- Unelongated Stems are an Active Nitrogen-Fixing Site in Rice Stems Supported by Both Sugar and Methane Under Low Nitrogen Conditions.Rice (New York, N.Y.) · 2025Article
- Article
- Response of root endosphere bacterial communities of typical rice cultivars to nitrogen fertilizer reduction at the jointing stage.Archives of microbiology · 2022Article
- Genotype and organ effect on the occupancy of phyllosphere prokaryotes in different rice landraces.Archives of microbiology · 2022Article
- Genotypic Variation of Endophytic Nitrogen-Fixing Activity and Bacterial Flora in Rice Stem Based on Sugar Content.Frontiers in plant science · 2021Article
- Alterations in the Endophyte-Enriched Root-Associated Microbiome of Rice Receiving Growth-Promoting Treatments of Urea Fertilizer and Rhizobium Biofertilizer.Microbial ecology · 2020Article
- Plant-Associated Microbes: From Rhizobia To Plant Microbiomes.Microbes and environments · 2018Article
- Nitrate Supply-Dependent Shifts in Communities of Root-Associated Bacteria in Arabidopsis.Microbes and environments · 2017Article
- Preferential association of endophytic bradyrhizobia with different rice cultivars and its implications for rice endophyte evolution.Applied and environmental microbiology · 2015Article
- The Type III Secretion System (T3SS) is a Determinant for Rice-Endophyte Colonization by Non-Photosynthetic Bradyrhizobium.Microbes and environments · 2015Article
- Elevated atmospheric CO2 levels affect community structure of rice root-associated bacteria.Frontiers in microbiology · 2015Article
- Characterization of leaf blade- and leaf sheath-associated bacterial communities and assessment of their responses to environmental changes in CO₂, temperature, and nitrogen levels under field conditions.Microbes and environments · 2015Article
- Phylogeny and functions of bacterial communities associated with field-grown rice shoots.Microbes and environments · 2014Article
- An assessment of urea-formaldehyde fertilizer on the diversity of bacterial communities in onion and sugar beet.Microbes and environments · 2014Article
- A novel function of controlled-release nitrogen fertilizers.Microbes and environments · 2014Article
- Effects of elevated carbon dioxide, elevated temperature, and rice growth stage on the community structure of rice root-associated bacteria.Microbes and environments · 2014Article
- Rediscovery of the microbial world in microbial ecology.Microbes and environments · 2013Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
To examine whether microbial community structure differs across rice genotypes, automated ribosomal intergenic spacer analysis (ARISA) was conducted. Nine cultivars of Oryza sativa ssp. indica or japonica and seven lines of other Oryza species were grown in paddy fields with low, standard, and high levels of N fertilization. Multidimensional scaling plots of bacterial ARISA for aerial parts of rice (shoots) revealed that the structure of shoot bacterial communities was significantly affected by plant genotype (indica or japonica) based on similarity tests, whereas root microbiomes were largely affected by the N fertilization level.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.