Evidence map›Paper›PMID 23977167›Full record

ArticlePloS one2013

HPat a decapping activator interacting with the miRNA effector complex.

Elisabeth Barišić-Jäger, Izabela Kręcioch, Stefanie Hosiner, Sanja Antic, Silke Dorner

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Cap-binding protein 4EHP effects translation silencing by microRNAs.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. The complexity of miRNA-mediated repression.Cell death and differentiation · 2015
    Review
  8. Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Elisabeth Barišić-JägerMax F. Perutz Laboratories, University of Vienna, Department of Microbiology, Immunbiology and Genetics, Vienna, Austria.
Izabela Kręcioch
Stefanie Hosiner
Sanja Antic
Silke Dorner

Funding

Austrian Science Fund FWF P 21488Austrian Science Fund FWF V 63
6 · The paper itself

Abstract

Animal miRNAs commonly mediate mRNA degradation and/or translational repression by binding to their target mRNAs. Key factors for miRNA-mediated mRNA degradation are the components of the miRNA effector complex (AGO1 and GW182) and the general mRNA degradation machinery (deadenylation and decapping enzymes). The CCR4-NOT1 complex required for the deadenylation of target mRNAs is directly recruited to the miRNA effector complex. However, it is unclear whether the following decapping step is only a consequence of deadenylation occurring independent of the miRNA effector complex or e.g. decapping activators can get recruited to the miRNA effector complex. In this study we performed split-affinity purifications in Drosophila cells and provide evidence for the interaction of the decapping activator HPat with the miRNA effector complex. Furthermore, in knockdown analysis of various mRNA degradation factors we demonstrate the importance of NOT1 for this interaction. This suggests that deadenylation and/or the recruitment of NOT1 protein precedes the association of HPat with the miRNA effector complex. Since HPat couples deadenylation and decapping, the recruitment of HPat to the miRNA effector complex provides a mechanism to commit the mRNA target for degradation.

Indexed as

AnimalsArgonaute ProteinsCaspasesCell LineChromatography, AffinityDrosophila melanogasterDrosophila ProteinsExoribonucleasesGene ExpressionGene Knockdown TechniquesImmunoprecipitationMicroRNAsProtein Interaction MappingRNA-Binding ProteinsRNA, MessengerRNA Processing, Post-TranscriptionalAGO1 protein, DrosophilaArgonaute ProteinsCaspasesDcp-1 protein, DrosophilaDrosophila ProteinsExoribonucleasesGw protein, DrosophilaMicroRNAsPatr-1 protein, Drosophilapcm protein, DrosophilaRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID23977167
PMCPMC3747071

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.