Evidence map›Paper›PMID 23977131›Full record

ArticlePloS one2013

Snowflake vitreoretinal degeneration (SVD) mutation R162W provides new insights into Kir7.1 ion channel structure and function.

Bikash R Pattnaik, Sara Tokarz, Matti P Asuma, Tyler Schroeder, Anil Sharma, Julie C Mitchell, Albert O Edwards, De-Ann M Pillers

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  7. Article
  8. KAmerican journal of physiology. Renal physiology · 2023
    Article
  9. Article
  10. Review
  11. Inward rectifier potassium (Kir) channels in the retina: living our vision.American journal of physiology. Cell physiology · 2022
    Review
  12. Kir7.1 disease mutant T153I within the inner pore affects KAmerican journal of physiology. Cell physiology · 2022
    Article
  13. Review
  14. Retinal Development and Pathophysiology in Kcnj13 Knockout Mice.Frontiers in cell and developmental biology · 2021
    Article
  15. Review
  16. Sensing through Non-Sensing Ocular Ion Channels.International journal of molecular sciences · 2020
    Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Bikash R PattnaikDepartment of Pediatrics, University of Wisconsin, Madison, Wisconsin, United States of America ; Department of Ophthalmology and Visual Sciences, University of Wisconsin, Madison, Wisconsin, United States of America ; McPherson Eye Research Institute, University of Wisconsin, Madison, Wisconsin, United States of America.
Sara Tokarz
Matti P Asuma
Tyler Schroeder
Anil Sharma
Julie C Mitchell
Albert O Edwards
De-Ann M Pillers
University of Wisconsin–Madison · USMayo Clinic · USSmith-Kettlewell Eye Research Institute · USUniversity of Oregon · US

Funding

ZOLEDRONATE PREVENTS BONE LOSS IN OVARIECTOMIZED RHESUS MONKEYSP51RR000167 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI KAUFMAN, PAUL L · 1985 to 2011
$106.7M
Institutional Clinical and Translational Science AwardUL1TR000427 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI DREZNER, MARC KENNETH · 2012 to 2016
$32.2M
INSTITUTIONAL CTSA (UW-MADISON): CLINICAL TRIALSUL1RR025011 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI DREZNER, MARC KENNETH · 2007 to 2011
$29.5M
Genetics of macular degenerationR01EY014467 · NEI · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI EDWARDS, ALBERT O · 2003 to 2007
$2.5M
NCATS NIH HHS 9U54TR000021NCATS NIH HHS UL1 TR000427NCRR NIH HHS 1UL1RR025011NCRR NIH HHS P51 RR000167NCRR NIH HHS UL1 RR025011NEI NIH HHS EY014467NEI NIH HHS R01 EY014467
6 · The paper itself

Abstract

Snowflake Vitreoretinal Degeneration (SVD) is associated with the R162W mutation of the Kir7.1 inwardly-rectifying potassium channel. Kir7.1 is found at the apical membrane of Retinal Pigment Epithelial (RPE) cells, adjacent to the photoreceptor neurons. The SVD phenotype ranges from RPE degeneration to an abnormal b-wave to a liquid vitreous. We sought to determine how this mutation alters the structure and function of the human Kir7.1 channel. In this study, we expressed a Kir7.1 construct with the R162W mutation in CHO cells to evaluate function of the ion channel. Compared to the wild-type protein, the mutant protein exhibited a non-functional Kir channel that resulted in depolarization of the resting membrane potential. Upon co-expression with wild-type Kir7.1, R162W mutant showed a reduction of IKir7.1 and positive shift in '0' current potential. Homology modeling based on the structure of a bacterial Kir channel protein suggested that the effect of R162W mutation is a result of loss of hydrogen bonding by the regulatory lipid binding domain of the cytoplasmic structure.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionAnimalsCell MembraneCHO CellsCricetinaeCricetulusHEK293 CellsHumansIon Channel GatingMacaca mulattaModels, MolecularMolecular Sequence DataMutant ProteinsMutationPotassium Channels, Inwardly RectifyingKir7.1 channelMutant ProteinsPotassium Channels, Inwardly RectifyingRubidium

Identifiers

PMID23977131
PMCPMC3747230
OpenAlexW2017310720

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.