Evidence map›Paper›PMID 23975452›Full record

ReviewBrain : a journal of neurology2014

Genotype-phenotype correlations in neurogenetics: Lesch-Nyhan disease as a model disorder.

Rong Fu, Irene Ceballos-Picot, Rosa J Torres, Laura E Larovere, Yasukazu Yamada, Khue V Nguyen, Madhuri Hegde, Jasper E Visser, David J Schretlen, William L Nyhan and 4 more

Open access · bronzeAbstract readReview
In one paragraph

Review in Brain : a journal of neurology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
6.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 129 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 9 institutions in 6 countries.

Rong Fu1 Departments of Neurology, Human Genetics and Paediatrics; Emory University, Atlanta GA, USA.
Irene Ceballos-Picot
Rosa J Torres
Laura E Larovere
Yasukazu Yamada
Khue V Nguyen
Madhuri Hegde
Jasper E Visser
David J Schretlen
William L Nyhan
Juan G Puig
Patrick J O'Neill
H A Jinnah
Lesch-Nyhan Disease International Study Group
Pediatrics and Genetics · USHospital Universitario La Paz · ESUniversity of California, San Diego · USAichi Human Service Center · JPJohns Hopkins Medicine · USRadboud University Medical Center · NLSorbonne Paris Cité · FRUniversidad Nacional de Córdoba · ARUniversity of Vermont · US

Funding

Lesch-Nyhan Disease: A Model for Complex Genetic, Proteomic & Metabolic PathwaysR24DK082840 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FRIEDMANN, THEODORE · 2008 to 2012
$7.3M
Lesch-Nyhan Disease: Neuroanatomic and Biochemical Bases of the PhenotypeR01HD053312 · NICHD · JOHNS HOPKINS UNIVERSITY · PI SCHRETLEN, DAVID J · 2008 to 2011
$2.0M
NICHD NIH HHS HD053312NIDDK NIH HHS DK082840
6 · The paper itself

Abstract

Establishing meaningful relationships between genetic variations and clinical disease is a fundamental goal for all human genetic disorders. However, these genotype-phenotype correlations remain incompletely characterized and sometimes conflicting for many diseases. Lesch-Nyhan disease is an X-linked recessive disorder that is caused by a wide variety of mutations in the HPRT1 gene. The gene encodes hypoxanthine-guanine phosphoribosyl transferase, an enzyme involved in purine metabolism. The fine structure of enzyme has been established by crystallography studies, and its function can be measured with very precise biochemical assays. This rich knowledge of genetic alterations in the gene and their functional effect on its protein product provides a powerful model for exploring factors that influence genotype-phenotype correlations. The present study summarizes 615 known genetic mutations, their influence on the gene product, and their relationship to the clinical phenotype. In general, the results are compatible with the concept that the overall severity of the disease depends on how mutations ultimately influence enzyme activity. However, careful evaluation of exceptions to this concept point to several additional genetic and non-genetic factors that influence genotype-phenotype correlations. These factors are not unique to Lesch-Nyhan disease, and are relevant to most other genetic diseases. The disease therefore serves as a valuable model for understanding the challenges associated with establishing genotype-phenotype correlations for other disorders.

Indexed as

Genetic Association StudiesAnimalsHumansHypoxanthine PhosphoribosyltransferaseLesch-Nyhan SyndromeMutationHypoxanthine Phosphoribosyltransferasegenotype–phenotype correlationsLesch-Nyhan diseaseneurogenetics

Identifiers

PMID23975452
PMCPMC3999711
OpenAlexW2097601313

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.