Evidence map›Paper›PMID 23974321›Full record

ArticleImmunogenetics2013

Killer cell immunoglobulin-like receptor (KIR) genes and their HLA-C ligands in a Ugandan population.

Annettee Nakimuli, Olympe Chazara, Lydia Farrell, Susan E Hiby, Stephen Tukwasibwe, Olatejumoye Knee, Jyothi Jayaraman, James A Traherne, Alison M Elliott, Pontiano Kaleebu and 2 more

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Immunogenetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 50 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. TheFrontiers in immunology · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Haplotype-Based Analysis ofFrontiers in immunology · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Pregnancy disorders in Africa and the obstetric dilemma.Transactions of the Royal Society of Tropical Medicine and Hygiene · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Annettee NakimuliDepartment of Obstetrics and Gynecology, Makerere University, Kampala, Uganda.
Olympe Chazara
Lydia Farrell
Susan E Hiby
Stephen Tukwasibwe
Olatejumoye Knee
Jyothi Jayaraman
James A Traherne
Alison M Elliott
Pontiano Kaleebu
Florence Mirembe
Ashley Moffett
University of Cambridge · GBMakerere University · UGUganda Virus Research Institute · UG

Funding

British Heart Foundation PG/09/077/27964Wellcome Trust 084344Wellcome Trust 085992/Z/08/ZWellcome Trust 090108/Z/09/ZWellcome Trust 095778Wellcome Trust 100714Wellcome Trust 100891
6 · The paper itself

Abstract

Killer cell immunoglobulin-like receptor (KIR) genes are expressed by natural killer cells and encoded by a family of genes exhibiting considerable haplotypic and allelic variation. HLA-C molecules, the dominant ligands for KIR, are present in all individuals and are discriminated by two KIR epitopes, C1 and C2. We studied the frequencies of KIR genes and HLA-C1 and C2 groups in a large cohort (n = 492) from Kampala, Uganda, East Africa and compared our findings with published data from other populations in sub-Saharan Africa (SSA) and several European populations. We find considerably more KIR diversity and weaker linkage disequilibrium in SSA compared to the European populations and describe several novel KIR genotypes. C1 and C2 frequencies were similar to other SSA populations with a higher frequency of the C2 epitope (54.9 %) compared to Europe (average 39.7 %). Analysis of this large cohort from Uganda in the context of other African populations reveals variations in KIR and HLA-C1 and C2 that are consistent with migrations within Africa and potential selection pressures on these genes. Our results will help understand how KIR/HLA-C interactions contribute to resistance to pathogens and reproductive success.

Indexed as

Genetics, PopulationAfrica South of the SaharaDNA, NeoplasmGenotypeHaplotypesHLA-C AntigensHumansLigandsLinkage DisequilibriumPolymerase Chain ReactionPolymorphism, Single-Stranded ConformationalReceptors, KIRUgandaUnited KingdomDNA, NeoplasmHLA-C AntigensLigandsReceptors, KIR

Identifiers

PMID23974321
PMCPMC3824577
OpenAlexW2061439212

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.