Evidence map›Paper›PMID 23974072›Full record

ArticleMethods (San Diego, Calif.)2013

Binding and isolation of tumor cells in biological media with perfluorocarbon microbubbles.

Guixin Shi, Wenjin Cui, Rajesh Mukthavaram, Yu-Tsueng Liu, Dmitri Simberg

Abstract read
In one paragraph

Article in Methods (San Diego, Calif.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Laboratory-Scale Production of Sterile Targeted Microbubbles.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  2. Article
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Guixin ShiSolid Tumor Therapeutics Program, Moores UCSD Cancer Center, UC San Diego, La Jolla, CA 92093, USA.
Wenjin Cui
Rajesh Mukthavaram
Yu-Tsueng Liu
Dmitri Simberg
University of California, San Diego · USUniversity of Colorado Denver · US

Funding

VIRAL MALIGNANCYP30CA023100 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DIANE M SIMEONE · 1985 to 2026
$124.9M
Targeted Smart Nanoplatforms for Multimode ImagingP50CA128346 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI STUPACK, DWAYNE G. · 2008 to 2012
$6.9M
High quality CTC isolation using microbubbles for downstream molecular analysisR33CA174554 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LIU, YU-TSUENG · 2013 to 2015
$956k
Isolation of rare circulating tumor cells from blood using microbubblesR21CA137721 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SIMBERG, DMITRI · 2009 to 2010
$360k
Non-invasive sampling of DNA markers for pancreatic cancer screeningR21CA164880 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LIU, YU-TSUENG · 2012 to 2013
$343k
NCI NIH HHS CA137721NCI NIH HHS CA16488NCI NIH HHS P30 CA023100NCI NIH HHS P30 CA23100NCI NIH HHS P50 CA128346NCI NIH HHS P50CA128346NCI NIH HHS R21 CA137721NCI NIH HHS R21 CA164880NCI NIH HHS R33 CA174554
6 · The paper itself

Abstract

With the emerging interest in personalized medicine, there is strong demand for new technologies for clinical sample interrogation. Exfoliated tumor cells in variety of pathological samples (e.g., blood, bone marrow, urine) could provide invaluable information for diagnosis and prognosis of cancers. Here we describe a detailed method for capture and isolation of tumor cells in medium, blood, or large issue buffy coat using EpCAM-targeted buoyant microbubbles (MBs). Perflorohexane gas lipid shell MBs were prepared with emulsification method and conjugated with antibody as described by us before [25]. The binding of EpCAM-targeted MBs to A549 (human lung carcinoma) and 4T1 (mouse breast carcinoma) cells spiked into BSA/PBS or blood was more than 90%, which was comparable with commercial anti-EpCAM immunomagnetic beads (DynaBeads). Anti-EpCAM MBs efficiently (75-82%) isolated BxPC3 pancreatic tumor cells spiked into medium, blood or a buffy coat, within 15-30 min of incubation. We discuss MB parameters and experimental conditions critical to achieve efficient cells binding and isolation. In conclusion, MB-assisted cell isolation is a promising method for rapid enrichment of cells and biomarkers from biological samples.

Indexed as

FluorocarbonsMicrobubblesAnimalsAntigens, NeoplasmCell Adhesion MoleculesCell Line, TumorCell SeparationCells, ImmobilizedEpithelial Cell Adhesion MoleculeFemaleHumansMammary Neoplasms, AnimalMiceNeoplastic Cells, CirculatingAntigens, NeoplasmCell Adhesion MoleculesEPCAM protein, humanEpithelial Cell Adhesion MoleculeFluorocarbonsBloodCTCEpCAMIsolationMicrobubbles

Identifiers

PMID23974072
PMCPMC3841068
OpenAlexW2090319912

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.