Evidence map›Paper›PMID 23973942›Full record

ReviewSeminars in cell & developmental biology2013

Retinoids induce stem cell differentiation via epigenetic changes.

Lorraine J Gudas

Open access · greenAbstract readReview
In one paragraph

Review in Seminars in cell & developmental biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 83 citations in OpenAlex.

  1. Review
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  3. Beneficial Effects ofNutrients · 2024
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  7. Review
  8. Micronutrient regulation of the DNA methylome.Frontiers in epigenetics and epigenomics · 2024
    Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. All-Frontiers in oncology · 2022
    Article
  14. Article
  15. Genome-Protecting Compounds as Potential Geroprotectors.International journal of molecular sciences · 2020
    Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Lorraine J GudasDepartment of Pharmacology, Weill Cornell Medical College, New York, NY 10065, USA; Department of Medicine, Weill Medical College of Cornell University, New York, NY 10065, USA. Electronic address: ljgudas@med.cornell.edu.
Cornell University · US

Funding

SQUAMOUS CELL CARCINOMAS - EFFECTS OF RETINOIDSR01DE010389 · NIDCR · WEILL MEDICAL COLL OF CORNELL UNIV · PI GUDAS, LORRAINE J · 1992 to 2014
$5.2M
Retinoic Acid Binding Proteins: Functional StudiesR01CA043796 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI GUDAS, LORRAINE J · 1987 to 2013
$5.0M
Alcohol-Induced Epigenetic Changes in Stem CellsR21AA021484 · NIAAA · WEILL MEDICAL COLL OF CORNELL UNIV · PI GUDAS, LORRAINE J · 2012 to 2013
$430k
NCI NIH HHS R01 CA043796NCI NIH HHS R01-CA043796NIAAA NIH HHS R21 AA021484NIAAA NIH HHS R21-AA021484NIDCR NIH HHS R01 DE010389NIDCR NIH HHS R01-DE010389
6 · The paper itself

Abstract

Vitamin A (all-trans retinol) and its active metabolites, collectively called retinoids, exert potent effects on stem cell differentiation and thus, the formation of the entire organism, in part via the modulation of the epigenome. All-trans retinoic acid (RA), through binding to the retinoic acid receptors (RARs), alters interactions of the RARs with various protein components of the transcription complex at numerous genes in stem cells, and some of these protein components of the transcription complex then either place or remove epigenetic marks on histones or on DNA, altering chromatin structure and leading to an exit from the self-renewing, pluripotent stem cell state. Different epigenetic mechanisms, i.e. first, primarily H3K27me3 marks and then DNA methylation, may be employed by embryonic stem cells and other stem cells for control of early vs. late stages of cell differentiation. Creating these stable epigenetic changes requires the actions of many molecules, including tet1, polycomb protein complexes (PRCs), miRNAs, DNA methyltransferases (DNMTs), and telomerase reverse transcriptase. A more complete understanding of retinoid-dependent stem cell differentiation should reward us with new insights into the failure to maintain a differentiated state that is an essential part of neoplastic cell transformation and cancer.

Indexed as

Epigenesis, GeneticAnimalsCell DifferentiationDNA MethylationHumansPolycomb-Group ProteinsRetinoidsStem CellsPolycomb-Group ProteinsRetinoids5hmC5-hydroxymethylcytosine5mC5-methylcytosineall-trans retinoic acidCARMco-activator associated arginine methyltransferase 1DifferentiationDNA methylationDNA methyltransferaseDNMTembryonic stemESHistone methylationmicro RNAmiRNAmixed lineage leukemiaMLLPolycomb group-repressive complexPolycomb/PRCPRCRARARRARERetinoic acidretinoic acid DNA response elementretinoic acid receptorReview

Identifiers

PMID23973942
PMCPMC3849227
OpenAlexW1995438296

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.