Evidence map›Paper›PMID 23973453›Full record

ArticleJournal of inorganic biochemistry2013

Crystal structure of the Pseudomonas aeruginosa cytoplasmic heme binding protein, Apo-PhuS.

Sarvind Tripathi, Maura J O'Neill, Angela Wilks, Thomas L Poulos

Open access · bronzeAbstract read
In one paragraph

Article in Journal of inorganic biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. HutW fromBiochemistry · 2021
    Article
  5. Article
  6. Review
  7. Ligand-induced allostery in the interaction of theProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  8. Heme Synthesis and Acquisition in Bacterial Pathogens.Journal of molecular biology · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Sarvind TripathiDepartment of Molecular Biology & Biochemistry, University of California, Irvine, CA 92697-3900, United States; Department of Pharmaceutical Science, University of California, Irvine, CA 92697-3900, United States; Department of Chemistry, University of California, Irvine, CA 92697-3900, United States.
Maura J O'Neill
Angela Wilks
Thomas L Poulos
University of California, Irvine · USUniversity of Maryland, Baltimore · US

Funding

ZWITTERION SURFACTANT DDMAB FOR IMPROV STABIL OF PROTEINP41RR001209 · NCRR · STANFORD UNIVERSITY · PI REESE, MICHAEL LLOYD · 1985 to 2011
$38.9M
STRUCTURAL STUDIES ON NITRIC OXIDE SYNTHASER01GM057353 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI POULOS, THOMAS L · 1998 to 2018
$6.8M
HEME ENZYME PROTEIN ENGINEERINGR01GM042614 · NIGMS · UNIVERSITY OF MD BIOTECHNOLOGY INSTITUTE · PI POULOS, THOMAS L · 1989 to 2014
$4.1M
Heme utilization and homeostasis in Pseudomonas aeruginosaR01AI102883 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI WILKS, ANGELA · 2013 to 2017
$2.0M
Structure-Function of the Shigella dysenteriae heme uptake operon (shu)R01AI085535 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI WILKS, ANGELA · 2009 to 2012
$1.5M
NCRR NIH HHS P41 RR001209NCRR NIH HHS P41RR001209NIAID NIH HHS AI85535NIAID NIH HHS R01 AI085535NIAID NIH HHS R01 AI102883NIGMS NIH HHS GM42614NIGMS NIH HHS R01 GM042614NIGMS NIH HHS R01 GM057353
6 · The paper itself

Abstract

Iron is an essential element to all living organisms and is an important determinant of bacterial virulence. Bacteria have evolved specialized systems to sequester and transport iron from the environment or host. Pseudomonas aeruginosa, an opportunistic pathogen, uses two outer membrane receptor mediated systems (Phu and Has) to utilize host heme as a source of iron. PhuS is a 39 kDa soluble cytoplasmic heme binding protein which interacts and transports heme from the inner membrane heme transporter to the cytoplasm where it is degraded by heme oxygenase thus releasing iron. PhuS is unique among other cytoplasmic heme transporter proteins owing to the presence of three histidines in the heme binding pocket which can potentially serve as heme ligands. Out of the three histidine residues on the heme binding helix, His 209 is conserved among heme trafficking proteins while His 210 and His 212 are unique to PhuS. Here we report the crystal structure of PhuS at 1.98Å resolution which shows a unique heme binding pocket and oligomeric structure compared to other known cytoplasmic heme transporter and accounts for some of the unusual biochemical properties of PhuS.

Indexed as

Protein Structure, TertiaryAmino Acid SequenceBacterial ProteinsBinding SitesCarrier ProteinsCrystallography, X-RayCytoplasmHeme-Binding ProteinsHemeproteinsHistidineModels, MolecularMolecular Sequence DataProtein MultimerizationProtein Structure, SecondaryPseudomonas aeruginosaSequence Homology, Amino AcidBacterial ProteinsCarrier ProteinsHeme-Binding ProteinsHemeproteinsHistidineHemeIronPhuSPseudomonas aeruginosaTransport

Identifiers

PMID23973453
PMCPMC3843485
OpenAlexW1980826154

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.