Evidence map›Paper›PMID 23970121›Full record

ArticleJournal of the American Society of Nephrology : JASN2013

ABIN1 dysfunction as a genetic basis for lupus nephritis.

Dawn J Caster, Erik A Korte, Sambit K Nanda, Kenneth R McLeish, Rebecca K Oliver, Rachel T G'sell, Ryan M Sheehan, Darrell W Freeman, Susan C Coventry, Jennifer A Kelly and 35 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 2 pooled it
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 2 syntheses or guidelines pooled it, 83 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. A Small Molecule Agonist of Krüppel-Like Factor 15 in Proteinuric Kidney Disease.Journal of the American Society of Nephrology : JASN · 2024
    Article
  4. Review
  5. Review
  6. Article
  7. Lupus Nephritis: Current Perspectives and Moving Forward.Journal of inflammation research · 2022
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Lupus science & medicine · 2020
    Review
  13. Article
  14. ABIN1 alleviates inflammatory responses and colitisTherapeutic advances in chronic disease · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Journal of clinical medicine · 2019
    Article
  20. NFκB and Kidney Injury.Frontiers in immunology · 2019
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

45 authors at 8 institutions in 3 countries.

Dawn J CasterDepartments of Medicine.
Erik A Korte
Sambit K Nanda
Kenneth R McLeish
Rebecca K Oliver
Rachel T G'sell
Ryan M Sheehan
Darrell W Freeman
Susan C Coventry
Jennifer A Kelly
Joel M Guthridge
Judith A James
Kathy L Sivils
Marta E Alarcon-Riquelme
R Hal Scofield
Indra Adrianto
Patrick M Gaffney
Anne M Stevens
Barry I Freedman
Carl D Langefeld
Betty P Tsao
Bernardo A Pons-Estel
Chaim O Jacob
Diane L Kamen
Gary S Gilkeson
Elizabeth E Brown
Graciela S Alarcon
Jeffrey C Edberg
Robert P Kimberly
Javier Martin
Joan T Merrill
John B Harley
Kenneth M Kaufman
John D Reveille
Juan-Manuel Anaya
Lindsey A Criswell
Luis M Vila
Michelle Petri
Rosalind Ramsey-Goldman
Sang-Cheol Bae
Susan A Boackle
Timothy J Vyse
Timothy B Niewold
Philip Cohen
David W Powell
MRC Protein Phosphorylation and Ubiquitylation Unit · GBDepartment of Veterans Affairs · AULouisville VA Medical Center · USMedical Research Council · GBUniversity of Louisville · USUniversity of Louisville Physicians · USBaxter (United States) · USVeterans Health Administration · US

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Colorado Clinical and Translational Sciences InstituteUL1TR001082 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2013 to 2017
$48.0M
MULTIDISCIPLINARY CLINICAL AND TRANSLATIONAL SCIENCE (MCTS) PROGRAM (UL1)UL1RR025741 · NCRR · NORTHWESTERN UNIVERSITY AT CHICAGO · PI GREENLAND, PHILIP · 2008 to 2011
$24.7M
Colorado Clinical and Translational Science Institute (UL1)UL1TR000154 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2012 to 2013
$20.4M
Program Project in the Genetics of SLEP01AR049084 · NIAMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI KIMBERLY, ROBERT P. · 2002 to 2012
$12.7M
The Interplay of Sociodemographic and Genetic Factors in SLE Health DisparitiesP60AR053308 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KATZ, PATRICIA P · 2006 to 2016
$11.8M
Multidisciplinary Clinical and Translational Science (MCTS) Program (UL1)UL1TR000150 · NCATS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LLOYD-JONES, DONALD M · 2012 to 2013
$10.1M
SOUTH CAROLINA CLINICAL & TRANSLATIONAL RESEARCH INSTITUTE (SCTR)UL1RR029882 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI BRADY, KATHLEEN T. · 2009 to 2011
$10.1M
UAB Center for Clinical and Translational Science (CCTS) UL1UL1TR000165 · NCATS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI KIMBERLY, ROBERT P. · 2012 to 2013
$9.6M
SequencingP01AI083194 · NIAID · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI HARLEY, JOHN BARKER · 2009 to 2013
$9.6M
HLA GENE COMPLEMENTATION IN PRIMARY SJOGREN'S AND LUPUSR01AI024717 · NIAID · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI KOTTYAN, LEAH CLAIRE, WEIRAUCH, MATTHEW TYSON · 1987 to 2025
$7.8M
Patient Resource CoreP60AR062755 · NIAMS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI GILKESON, GARY S · 2012 to 2016
$5.8M
BLRD VA I01 BX001834Medical Research Council MC_EX_G0800765Medical Research Council MC_EX_UU_G0800765Medical Research Council MC_U127084348Medical Research Council MC_UU_12016/11NCATS NIH HHS TR000165NCATS NIH HHS UL1 TR000150NCATS NIH HHS UL1 TR000154NCATS NIH HHS UL1 TR000165NCATS NIH HHS UL1 TR001082NCI NIH HHS P30 CA046934NCRR NIH HHS RR025741NCRR NIH HHS UL1 RR025741NCRR NIH HHS UL1 RR029882NCRR NIH HHS UL1RR029882NIAID NIH HHS AI024717NIAID NIH HHS AI063274NIAID NIH HHS AI083194NIAID NIH HHS AI103980NIAID NIH HHS K24 AI078004NIAID NIH HHS P01 AI083194NIAID NIH HHS R01 AI024717NIAID NIH HHS R01 AI063274NIAID NIH HHS R21 AI070304NIAID NIH HHS R21 AI103980NIAID NIH HHS R37 AI024717NIAID NIH HHS R56 AI063274NIAMS NIH HHS AR002138NIAMS NIH HHS AR043814NIAMS NIH HHS AR049084NIAMS NIH HHS AR063124NIAMS NIH HHS AR158959NIAMS NIH HHS AR33062NIAMS NIH HHS AR 49084NIAMS NIH HHS K24 AR002138NIAMS NIH HHS P01 AR049084NIAMS NIH HHS P60 AR030692NIAMS NIH HHS P60 AR053308NIAMS NIH HHS P60 AR062755NIAMS NIH HHS P60AR062755NIAMS NIH HHS R01 AR033062NIAMS NIH HHS R01 AR043814NIAMS NIH HHS R01 AR063124NIDDK NIH HHS DK176743NIGMS NIH HHS GM103456NIGMS NIH HHS P20 GM103456NIGMS NIH HHS P20GM103456OCPHP CDC HHS PR094002Wellcome Trust 100294
6 · The paper itself

Abstract

The genetic factors underlying the pathogenesis of lupus nephritis associated with systemic lupus erythematosus are largely unknown, although animal studies indicate that nuclear factor (NF)-κB is involved. We reported previously that a knockin mouse expressing an inactive form of ABIN1 (ABIN1[D485N]) develops lupus-like autoimmune disease and demonstrates enhanced activation of NF-κB and mitogen-activated protein kinases in immune cells after toll-like receptor stimulation. In the current study, we show that ABIN1[D485N] mice develop progressive GN similar to class III and IV lupus nephritis in humans. To investigate the clinical relevance of ABIN1 dysfunction, we genotyped five single-nucleotide polymorphisms in the gene encoding ABIN1, TNIP1, in samples from European-American, African American, Asian, Gullah, and Hispanic participants in the Large Lupus Association Study 2. Comparing cases of systemic lupus erythematosus with nephritis and cases of systemic lupus erythematosus without nephritis revealed strong associations with lupus nephritis at rs7708392 in European Americans and rs4958881 in African Americans. Comparing cases of systemic lupus erythematosus with nephritis and healthy controls revealed a stronger association at rs7708392 in European Americans but not at rs4958881 in African Americans. Our data suggest that variants in the TNIP1 gene are associated with the risk for lupus nephritis and could be mechanistically involved in disease development via aberrant regulation of NF-κB and mitogen-activated protein kinase activity.

Indexed as

AnimalsDNA-Binding ProteinsFluorescent Antibody TechniqueHumansKidneyLupus NephritisMiceMice, Inbred C57BLMice, KnockoutNF-kappa BPolymorphism, Single NucleotideDNA-Binding ProteinsNF-kappa BTNIP1 protein, human

Identifiers

PMID23970121
PMCPMC3810087
OpenAlexW2149146541

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.