Evidence map›Paper›PMID 23969856›Full record

ArticleCell death & disease2013

Multiple mechanisms repress N-Bak mRNA translation in the healthy and apoptotic neurons.

M Jakobson, M Jakobson, O Llano, J Palgi, U Arumäe

Open access · goldAbstract read
In one paragraph

Article in Cell death & disease, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Autophagy and apoptosis cascade: which is more prominent in neuronal death?Cellular and molecular life sciences : CMLS · 2021
    Review
  4. Article
  5. Article
  6. Review
  7. Neuronal Cell Death.Physiological reviews · 2018
    Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Non-coding functions of alternative pre-mRNA splicing in development.Seminars in cell & developmental biology · 2015
    Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

M JakobsonInstitute of Biotechnology, University of Helsinki, FIN-00014, Helsinki, Finland.
M Jakobson
O Llano
J Palgi
U Arumäe
Helsinki Institute of Physics · FITallinn University of Technology · EEUniversity of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

N-Bak is a neuron-specific BH3-only splice variant of pro-apoptotic Bcl-2 family member Bak. We have shown that its mRNA is stable in the neurons, whereas the protein cannot be detected by antibodies, suggesting a strong translational arrest of the mRNA. Here we identify two regulatory elements in the N-Bak mRNA that significantly repress translation in the luciferase reporter assay: an upstream open reading frame in the 5'-untranslated region (UTR) and naturally spliced exon-exon junction downstream of the premature translation termination codon in the 3'UTR. We also show that N-Bak mRNA is stored in granular structures in the sympathetic neurons and stays in these granules during intrinsic apoptosis. Finally, we confirm the absence of N-Bak protein by quantitative mass spectrometry analysis in the healthy, apoptotic or stressed sympathetic and cortical neurons. We conclude that N-Bak mRNA is translationally repressed by multiple mechanisms, and the protein does not participate in the classical apoptosis or cellular stress response.

Indexed as

3' Untranslated Regions5' Untranslated RegionsAnimalsApoptosisbcl-2 Homologous Antagonist-Killer ProteinCell Line, TumorCytoplasmic GranulesGenes, ReporterHumansLuciferases, FireflyMiceNeuronsProtein BiosynthesisRegulatory Sequences, Nucleic AcidRNA, MessengerStress, Physiological3' Untranslated Regions5' Untranslated Regionsbcl-2 Homologous Antagonist-Killer ProteinLuciferases, FireflyRNA, Messenger

Identifiers

PMID23969856
PMCPMC3763458
OpenAlexW1980262698

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.