ArticleJournal of experimental botany2013
Analysis of the early-flowering mechanisms and generation of T-DNA tagging lines in Kitaake, a model rice cultivar.
Article in Journal of experimental botany, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.
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Who cites it
32 citing papers in PubMed, 56 citations in OpenAlex.
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- The immune receptor XA21 causes semi-male sterility and grain loss in rice.Frontiers in plant science · 2025Article
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- A (conditional) role for labdane-related diterpenoid natural products in rice stomatal closure.The New phytologist · 2021Article
- A novel genotype DATTO5 developed using the five genes exhibits the fastest heading date designed in rice.Breeding science · 2020Article
- Regulation of monocot and dicot plant development with constitutively active alleles of phytochrome B.Plant direct · 2020Article
- Genome sequence of the model rice variety KitaakeX.BMC genomics · 2019Article
- Whole-Genome Sequencing Identifies a Rice Grain Shape Mutant, gs9-1.Rice (New York, N.Y.) · 2019Article
- Deciphering the functions of the outer membrane porin OprBXo involved in virulence, motility, exopolysaccharide production, biofilm formation and stress tolerance in Xanthomonas oryzae pv. oryzae.Molecular plant pathology · 2018Article
- Elucidating Functions of FleQ inInternational journal of molecular sciences · 2018Article
- Genome-wide analysis of root hair-preferential genes in rice.Rice (New York, N.Y.) · 2018Article
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- Loss-of-Function Alleles ofFrontiers in plant science · 2018Article
- QTL-seq analysis identifies two genomic regions determining the heading date of foxtail millet,Breeding science · 2017Article
- KNOX Protein OSH15 Induces Grain Shattering by Repressing Lignin Biosynthesis Genes.Plant physiology · 2017Article
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Authors and funding
4 authors at 1 institution in 1 country.
Funding
Abstract
As an extremely early flowering cultivar, rice cultivar Kitaake is a suitable model system for molecular studies. Expression analyses revealed that transcript levels of the flowering repressor Ghd7 were decreased while those of its downstream genes, Ehd1, Hd3a, and RFT1, were increased. Sequencing the known flowering-regulator genes revealed mutations in Ghd7 and OsPRR37 that cause early translation termination and amino acid substitutions, respectively. Genetic analysis of F2 progeny from a cross between cv. Kitaake and cv. Dongjin indicated that those mutations additively contribute to the early-flowering phenotype in cv. Kitaake. Because the short life cycle facilitates genetics research, this study generated 10 000 T-DNA tagging lines and deduced 6758 flanking sequence tags (FSTs), in which 3122 were genic and 3636 were intergenic. Among the genic lines, 367 (11.8%) were inserted into new genes that were not previously tagged. Because the lines were generated by T-DNA that contained the promoterless GUS reporter gene, which had an intron with triple splicing donors/acceptors in the right border region, a high efficiency of GUS expression was shown in various organs. Sequencing of the GUS-positive lines demonstrated that the third splicing donor and the first splicing acceptor of the vector were extensively used. The FST data have now been released into the public domain for seed distribution and facilitation of rice research.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.