Evidence map›Paper›PMID 23965306›Full record

ArticleNucleic acids research2013

DAZAP1 regulates the splicing of Crem, Crisp2 and Pot1a transcripts.

Hsiang-Ying Chen, Yueh-Hsiang Yu, Pauline H Yen

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

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  13. DAZ Family Proteins, Key Players for Germ Cell Development.International journal of biological sciences · 2015
    Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Hsiang-Ying ChenGraduate Institute of Life Sciences, National Defense Medical Center, Taipei 11490, Taiwan and Institute of Biomedical Sciences, Academia Sinica, Taipei 11529, Taiwan.
Yueh-Hsiang Yu
Pauline H Yen
National Defense Medical Center · TWInstitute of Biomedical Sciences, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Deleted in Azoospermia Associated Protein 1 (DAZAP1) is a ubiquitous heterogeneous nuclear ribonucleoprotein (hnRNP) that is expressed abundantly in the testis. DAZAP1 deficiency in mice results in growth retardation and spermatogenic arrest. Previous reports on DAZAP1's binding to several naturally occurring splicing mutations support a role for DAZAP1 in RNA splicing. To elucidate the biological function(s) of DAZAP1 and to search for its natural RNA substrates, we used microarrays to compare the expression profiles and exon usages of wild-type and Dazap1 mutant testes and identified three genes (Crem, Crisp2 and Pot1a) with aberrant RNA splicing in the mutant testes. We further demonstrated that DAZAP1, but not DAZAP1 mutant proteins, promoted the inclusion of Crem exon 4, Crisp2 exon 9 and Pot1a exon 4 in splicing reporter transcripts in cultured cells. Additional studies on the binding of DAZAP1 to the exons and their flanking intronic sequences and the effects of minigene deletions on exon inclusion identified regulatory regions in Crem intron 3, Crisp2 intron 9 and Pot1a intron 4 where DAZAP1 bound and regulated splicing. Aberrant splicing of the Pot1a gene, which encodes an essential protein that protects telomere integrity, may partially account for the growth retardation phenotype of DAZAP1-deficient mice.

Indexed as

Alternative SplicingAnimalsCell Adhesion MoleculesCells, CulturedCyclic AMP Response Element ModulatorDNA-Binding ProteinsExonsGlycoproteinsMembrane ProteinsMiceRegulatory Sequences, Ribonucleic AcidRNA-Binding ProteinsShelterin ComplexTelomere-Binding ProteinsCell Adhesion MoleculesCrem protein, mouseCrisp2 protein, mouseCyclic AMP Response Element ModulatorDazap1 protein, mouseDNA-Binding ProteinsGlycoproteinsMembrane ProteinsPOT1 protein, mouseRegulatory Sequences, Ribonucleic AcidRNA-Binding ProteinsShelterin ComplexTelomere-Binding Proteins

Identifiers

PMID23965306
PMCPMC3834821
OpenAlexW2167154687

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.