Evidence map›Paper›PMID 23963457›Full record

ArticleThe Journal of biological chemistry2013

Dna2 is involved in CA strand resection and nascent lagging strand completion at native yeast telomeres.

Martin E Budd, Judith L Campbell

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Martin E BuddFrom Braun Laboratories, California Institute of Technology, Pasadena, California 91125.
Judith L Campbell
California Institute of Technology · US

Funding

Enzyme Interactions at the DNA Replication ForkR01GM078666 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI CAMPBELL, JUDITH L · 2006 to 2009
$1.5M
NIGMS NIH HHS GM078666NIGMS NIH HHS R01 GM078666
6 · The paper itself

Abstract

Post-replicational telomere end processing involves both extension by telomerase and resection to produce 3'-GT-overhangs that extend beyond the complementary 5'-CA-rich strand. Resection must be carefully controlled to maintain telomere length. At short de novo telomeres generated artificially by HO endonuclease in the G2 phase, we show that dna2-defective strains are impaired in both telomere elongation and sequential 5'-CA resection. At native telomeres in dna2 mutants, GT-overhangs do clearly elongate during late S phase but are shorter than in wild type, suggesting a role for Dna2 in 5'-CA resection but also indicating significant redundancy with other nucleases. Surprisingly, elimination of Mre11 nuclease or Exo1, which are complementary to Dna2 in resection of internal double strand breaks, does not lead to further shortening of GT-overhangs in dna2 mutants. A second step in end processing involves filling in of the CA-strand to maintain appropriate telomere length. We show that Dna2 is required for normal telomeric CA-strand fill-in. Yeast dna2 mutants, like mutants in DNA ligase 1 (cdc9), accumulate low molecular weight, nascent lagging strand DNA replication intermediates at telomeres. Based on this and other results, we propose that FEN1 is not sufficient and that either Dna2 or Exo1 is required to supplement FEN1 in maturing lagging strands at telomeres. Telomeres may be among the subset of genomic locations where Dna2 helicase/nuclease is essential for the two-nuclease pathway of primer processing on lagging strands.

Indexed as

AcetyltransferasesDNA Breaks, Double-StrandedDNA, FungalDNA HelicasesDNA RepairDNA, Single-StrandedElectrophoresis, Agar GelEndodeoxyribonucleasesExodeoxyribonucleasesFlow CytometryMembrane ProteinsMutationProtein BindingSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsS PhaseAcetyltransferasesDNA2 protein, S cerevisiaeDNA, FungalDNA HelicasesDNA, Single-StrandedELO2 protein, S cerevisiaeEndodeoxyribonucleasesexodeoxyribonuclease IExodeoxyribonucleasesMembrane ProteinsMRE11 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsDna2 Helicase/NucleaseDNA Damage ResponseDNA RecombinationDNA RepairDNA ReplicationExo1 NucleaseFEN1MRXOkazaki Fragment ProcessingYeast

Identifiers

PMID23963457
PMCPMC3795242
OpenAlexW2135321245

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.