ArticleScientific reports2013
The maize leaf lipidome shows multilevel genetic control and high predictive value for agronomic traits.
Article in Scientific reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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16 citing papers in PubMed, 36 citations in OpenAlex.
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- Genomic prediction for agronomic traits in a diverse Flax (Linum usitatissimum L.) germplasm collection.Scientific reports · 2024Article
- Hello darkness, my old friend: 3-KETOACYL-COENZYME A SYNTHASE4 is a branch point in the regulation of triacylglycerol synthesis in Arabidopsis thaliana.The Plant cell · 2023Article
- An adaptive teosinteProceedings of the National Academy of Sciences of the United States of America · 2022Article
- Complex Changes in Membrane Lipids Associated with the Modification of Autophagy inMetabolites · 2022Article
- The utility of metabolomics as a tool to inform maize biology.Plant communications · 2021Review
- Harnessing Genetic Diversity in the USDA Pea Germplasm Collection Through Genomic Prediction.Frontiers in genetics · 2021Article
- Genome-Wide Association Study Reveals Key Genes for Differential Lead Accumulation and Tolerance in NaturalFrontiers in plant science · 2021Article
- Hybrid Breeding for MLN Resistance: Heterosis, Combining Ability, and Hybrid Prediction.Plants (Basel, Switzerland) · 2020Article
- Biomarkers for grain yield stability in rice under drought stress.Journal of experimental botany · 2020Article
- Genome-Wide Analyses and Prediction of Resistance to MLN in Large Tropical Maize Germplasm.Genes · 2019Article
- Article
- Relationships of Leaf Net Photosynthesis, Stomatal Conductance, and Mesophyll Conductance to Primary Metabolism: A Multispecies Meta-Analysis Approach.Plant physiology · 2016Review
- Fortune telling: metabolic markers of plant performance.Metabolomics : Official journal of the Metabolomic Society · 2016Review
- The Black-Box of Plant Apoplast Lipidomes.Frontiers in plant science · 2016Article
- Natural Variation of Plant Metabolism: Genetic Mechanisms, Interpretive Caveats, and Evolutionary and Mechanistic Insights.Plant physiology · 2015Article
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Authors and funding
5 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Although the plant lipidome show an enormous level of structural and functional diversity, our knowledge about its genetic control and its connection to whole-plant phenotypes is very limited. Here, we profiled 563 lipid species with UPLC-FT-MS in 289 field-grown inbred lines genotyped with 56,110 SNPs. Genome-wide association study identified 174 associations for 76 lipids explaining up to 31.4% of the genetic variance (P-value 8.4 × 10(-18)). Candidate genes were found for lipid synthesis, breakdown, transfer, and protection against peroxidation. The detected SNP-lipid associations could be grouped into associations with 1) individual lipids, 2) lipids from one biochemical class, and 3) lipids from several classes, suggesting a multilevel genetic control architecture. We further found a strong connection between the lipidome and agronomic traits in field-evaluated hybrid progeny. A cross-validated prediction model yielded correlations of up to 0.78 suggesting that the lipidome accurately predicts agronomic traits relevant in hybrid maize breeding.
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