Evidence map›Paper›PMID 23962496›Full record

ArticleNeurobiology of aging2014

Protective effect of LRRK2 p.R1398H on risk of Parkinson's disease is independent of MAPT and SNCA variants.

Michael G Heckman, Alexis Elbaz, Alexandra I Soto-Ortolaza, Daniel J Serie, Jan O Aasly, Grazia Annesi, Georg Auburger, Justin A Bacon, Magdalena Boczarska-Jedynak, Maria Bozi and 46 more

Open access · bronzeAbstract read
In one paragraph

Article in Neurobiology of aging, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 2 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 2 syntheses or guidelines pooled it, 40 citations in OpenAlex.

  1. Association between alpha-synuclein (SNCA) rs11931074 variability and susceptibility to Parkinson's disease: an updated meta-analysis of 41,811 patients.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2020
    Pooled it
  2. An updated analysis with 45,078 subjects confirms the association between SNCA rs11931074 and Parkinson's disease.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2018
    Pooled it
  3. Article
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  7. Article
  8. Article
  9. Genetic Risk Factors for Essential Tremor: A Review.Tremor and other hyperkinetic movements (New York, N.Y.) · 2020
    Review
  10. Association of MAPT H1 subhaplotypes with neuropathology of lewy body disease.Movement disorders : official journal of the Movement Disorder Society · 2019
    Article
  11. Review
  12. A Comprehensive Analysis of Population Differences inFrontiers in aging neuroscience · 2019
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Genetic susceptibility variants in parkinsonism.Parkinsonism & related disorders · 2016
    Review
  18. Article
  19. Article
  20. Heterogeneity of leucine-rich repeat kinase 2 mutations: genetics, mechanisms and therapeutic implications.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

56 authors at 20 institutions in 15 countries.

Michael G HeckmanSection of Biostatistics, Mayo Clinic, Jacksonville, FL, USA. Electronic address: heckman.michael@mayo.edu.
Alexis Elbaz
Alexandra I Soto-Ortolaza
Daniel J Serie
Jan O Aasly
Grazia Annesi
Georg Auburger
Justin A Bacon
Magdalena Boczarska-Jedynak
Maria Bozi
Laura Brighina
Marie-Christine Chartier-Harlin
Efthimios Dardiotis
Alain Destée
Carlo Ferrarese
Alessandro Ferraris
Brian Fiske
Suzana Gispert
Georgios M Hadjigeorgiou
Nobutaka Hattori
John P A Ioannidis
Barbara Jasinska-Myga
Beom S Jeon
Yun Joong Kim
Christine Klein
Rejko Kruger
Elli Kyratzi
Chin-Hsien Lin
Katja Lohmann
Marie-Anne Loriot
Timothy Lynch
George D Mellick
Eugénie Mutez
Grzegorz Opala
Sung Sup Park
Simona Petrucci
Aldo Quattrone
Manu Sharma
Peter A Silburn
Young Ho Sohn
Leonidas Stefanis
Vera Tadic
Hiroyuki Tomiyama
Ryan J Uitti
Enza Maria Valente
Demetrios K Vassilatis
Carles Vilariño-Güell
Linda R White
Karin Wirdefeldt
Zbigniew K Wszolek
Ruey-Meei Wu
Georgia Xiromerisiou
Demetrius M Maraganore
Matthew J Farrer
Owen A Ross
Genetic Epidemiology Of Parkinson's Disease (GEO-PD) Consortium
Mayo Clinic · USInserm · FRAcademy of Athens · GRMedical University of Silesia · PLUniversity of Thessaly · GRCasa Sollievo della Sofferenza · ITGoethe University Frankfurt · DEJuntendo University · JPNational Academies of Sciences, Engineering, and Medicine · USNational Taiwan University · TWNorwegian University of Science and Technology · NOSeoul National University Hospital · KRUniversity of British Columbia · CAUniversity of Lübeck · DEUniversity of Milano-Bicocca · ITDélégation Paris 5 · FRGerman Center for Neurodegenerative Diseases · DEGriffith University · AUHallym University · KRKarolinska Institutet · SE

Funding

Supplement-ES10751 (Molecular Epidemiology of PD)R01ES010751 · NIEHS · MAYO CLINIC ROCHESTER · PI MARAGANORE, DEMETRIUS MICHAEL · 2000 to 2010
$9.2M
Neuropathology CoreP50NS072187 · NINDS · MAYO CLINIC JACKSONVILLE · PI DICKSON, DENNIS WILLIAM · 2010 to 2017
$8.7M
PD iPS Cell Line Research ConsortiumRC2NS070276 · NINDS · MCLEAN HOSPITAL · PI ISACSON, OLE · 2009 to 2010
$3.8M
Biomarkers for Preclinical Parkinson's diseaseR01NS057567 · NINDS · UNIVERSITY OF WASHINGTON · PI ZHANG, JING · 2008 to 2012
$3.1M
Understanding the role of MAPT in Parkinsonian disordersR01NS078086 · NINDS · MAYO CLINIC JACKSONVILLE · PI ROSS, OWEN A · 2012 to 2016
$1.7M
NIEHS NIH HHS R01 ES010751NIEHS NIH HHS R01ES10751NINDS NIH HHS 1RC2NS070276NINDS NIH HHS NS057567NINDS NIH HHS P50 NS072187NINDS NIH HHS P50NS072187NINDS NIH HHS R01 NS057567NINDS NIH HHS R01 NS078086NINDS NIH HHS RC2 NS070276
6 · The paper itself

Abstract

The best validated susceptibility variants for Parkinson's disease are located in the α-synuclein (SNCA) and microtubule-associated protein tau (MAPT) genes. Recently, a protective p.N551K-R1398H-K1423K haplotype in the leucine-rich repeat kinase 2 (LRRK2) gene was identified, with p.R1398H appearing to be the most likely functional variant. To date, the consistency of the protective effect of LRRK2 p.R1398H across MAPT and SNCA variant genotypes has not been assessed. To address this, we examined 4 SNCA variants (rs181489, rs356219, rs11931074, and rs2583988), the MAPT H1-haplotype-defining variant rs1052553, and LRRK2 p.R1398H (rs7133914) in Caucasian (n = 10,322) and Asian (n = 2289) series. There was no evidence of an interaction of LRRK2 p.R1398H with MAPT or SNCA variants (all p ≥ 0.10); the protective effect of p.R1398H was observed at similar magnitude across MAPT and SNCA genotypes, and the risk effects of MAPT and SNCA variants were observed consistently for LRRK2 p.R1398H genotypes. Our results indicate that the association of LRRK2 p.R1398H with Parkinson's disease is independent of SNCA and MAPT variants, and vice versa, in Caucasian and Asian populations.

Indexed as

Genetic VariationAdolescentAdultAgedAged, 80 and overalpha-SynucleinAsian PeopleFemaleGenetic Predisposition to DiseaseGenotypeHaplotypesHumansLeucine-Rich Repeat Serine-Threonine Protein Kinase-2MaleMiddle AgedParkinson Diseasealpha-SynucleinLeucine-Rich Repeat Serine-Threonine Protein Kinase-2LRRK2 protein, humanMAPT protein, humanProtein Serine-Threonine KinasesSNCA protein, humantau ProteinsGeneticsInteractionLRRK2MAPTParkinson's diseaseSNCA

Identifiers

PMID23962496
PMCPMC3829604
OpenAlexW2116080645

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.