Evidence map›Paper›PMID 23961311›Full record

ArticleStandards in genomic sciences2013

Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA(T)).

Konstantinos Mavromatis, Erko Stackebrandt, Brittany Held, Alla Lapidus, Matt Nolan, Susan Lucas, Nancy Hammon, Shweta Deshpande, Jan-Fang Cheng, Roxanne Tapia and 22 more

Abstract read
In one paragraph

Article in Standards in genomic sciences, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors.

Konstantinos MavromatisDOE Joint Genome Institute, Walnut Creek, California, USA.
Erko Stackebrandt
Brittany Held
Alla Lapidus
Matt Nolan
Susan Lucas
Nancy Hammon
Shweta Deshpande
Jan-Fang Cheng
Roxanne Tapia
Lynne A Goodwin
Sam Pitluck
Konstantinos Liolios
Ioanna Pagani
Natalia Ivanova
Natalia Mikhailova
Marcel Huntemann
Amrita Pati
Amy Chen
Krishna Palaniappan
Miriam Land
Manfred Rohde
Stefan Spring
Markus Göker
Tanja Woyke
John C Detter
James Bristow
Jonathan A Eisen
Victor Markowitz
Philip Hugenholtz
Hans-Peter Klenk
Nikos C Kyrpides

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anaerobaculum mobile Menes and Muxí 2002 is one of three described species of the genus Anaerobaculum, family Synergistaceae, phylum Synergistetes. This anaerobic and motile bacterium ferments a range of carbohydrates and mono- and dicarboxylic acids with acetate, hydrogen and CO2 as end products. A. mobile NGA(T) is the first member of the genus Anaerobaculum and the sixth member of the phylum Synergistetes with a completely sequenced genome. Here we describe the features of this bacterium, together with the complete genome sequence, and annotation. The 2,160,700 bp long single replicon genome with its 2,053 protein-coding and 56 RNA genes is part of the G enomic E ncyclopedia of Bacteria and Archaea project.

Indexed as

anaerobicchemoorganotrophiccrotonate-reducerflagellumGEBAGram-negativemotilenon-spore formingrod-shapedSynergistaceaeSynergistetes

Identifiers

PMID23961311
PMCPMC3739175

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.