Evidence map›Paper›PMID 23960437›Full record

ArticleJournal of Korean medical science2013

Screening of dihydropyrimidine dehydrogenase genetic variants by direct sequencing in different ethnic groups.

Joong-Gon Shin, Hyun Sub Cheong, Jason Yongha Kim, Lyoung Hyo Kim, Chang Soo Han, Ji On Kim, Hae Deun Kim, Young Hoon Kim, Myeon Woo Chung, Soon Young Han and 1 more

Open access · goldAbstract read
In one paragraph

Article in Journal of Korean medical science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Sources of Interindividual Variability.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  4. Review
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Joong-Gon ShinDepartment of Life Science, Sogang University, Seoul, Korea.
Hyun Sub Cheong
Jason Yongha Kim
Lyoung Hyo Kim
Chang Soo Han
Ji On Kim
Hae Deun Kim
Young Hoon Kim
Myeon Woo Chung
Soon Young Han
Hyoung Doo Shin
National Institute of Food and Drug Safety Evaluation · KRSNP Genetics (South Korea) · KRSogang University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dihydropyrimidine dehydrogenase (DPYD) is an enzyme that regulates the rate-limiting step in pyrimidine metabolism, especially catabolism of fluorouracil, a chemotherapeutic agent for cancer. In order to determine the genetic distribution of DPYD, we directly sequenced 288 subjects from five ethnic groups (96 Koreans, 48 Japanese, 48 Han Chinese, 48 African Americans, and 48 European Americans). As a result, 56 polymorphisms were observed, including 6 core polymorphisms and 18 novel polymorphisms. Allele frequencies were nearly the same across the Asian populations, Korean, Han Chinese and Japanese, whereas several SNPs showed different genetic distributions between Asians and other ethnic populations (African American and European American). Additional in silico analysis was performed to predict the function of novel SNPs. One nonsynonymous SNP (+199381A > G, Asn151Asp) was predicted to change its polarity of amino acid (Asn, neutral to Asp, negative). These findings would be valuable for further research, including pharmacogenetic and drug responses studies.

Indexed as

AllelesAmino AcidsAsian PeopleBlack or African AmericanDihydrouracil Dehydrogenase (NADP)EthnicityFluorouracilGene FrequencyGenotypeHumansPolymorphism, Single NucleotideSequence Analysis, DNAWhite PeopleAmino AcidsDihydrouracil Dehydrogenase (NADP)FluorouracilDihydropyrimidine DehydrogenaseEthnic GropusFluorouracilPharmacogenetics

Identifiers

PMID23960437
PMCPMC3744698
OpenAlexW2150625721

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.