Evidence map›Paper›PMID 23959867›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Insights into Eph receptor tyrosine kinase activation from crystal structures of the EphA4 ectodomain and its complex with ephrin-A5.

Kai Xu, Dorothea Tzvetkova-Robev, Yan Xu, Yehuda Goldgur, Yee-Peng Chan, Juha P Himanen, Dimitar B Nikolov

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 73 citations in OpenAlex.

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  7. Eph receptor signaling complexes in the plasma membrane.Trends in biochemical sciences · 2024
    Review
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  19. Molecular Inversion Probe-Based Sequencing ofInternational journal of molecular sciences · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Kai XuStructural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA.
Dorothea Tzvetkova-Robev
Yan Xu
Yehuda Goldgur
Yee-Peng Chan
Juha P Himanen
Dimitar B Nikolov
Memorial Sloan Kettering Cancer Center · USUniformed Services University of the Health Sciences · US

Funding

STRUCTURAL STUDY OF EPH RECEPTORS AND EPHRINSR01NS038486 · NINDS · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI NIKOLOV, DIMITAR B · 1999 to 2018
$5.9M
NINDS NIH HHS R01 NS038486NINDS NIH HHS R01NS038486
6 · The paper itself

Abstract

Eph receptor tyrosine kinases and their ephrin ligands mediate cell signaling during normal and oncogenic development. Eph signaling is initiated in a multistep process leading to the assembly of higher-order Eph/ephrin clusters that set off bidirectional signaling in interacting cells. Eph and ephrins are divided in two subclasses based on their abilities to bind and activate each other and on sequence conservation. EphA4 is an exception to the general rule because it can be activated by both A- and B-class ephrin ligands. Here we present high-resolution structures of the complete EphA4 ectodomain and its complexes with ephrin-A5. The structures reveal how ligand binding promotes conformational changes in the EphA4 ligand-binding domain allowing the formation of signaling clusters at the sites of cell-cell contact. In addition, the structural data, combined with structure-based mutagenesis, reveal a previously undescribed receptor-receptor interaction between the EphA4 ligand-binding and membrane-proximal fibronectin domains, which is functionally important for efficient receptor activation.

Indexed as

Protein Structure, TertiarySignal TransductionBinding SitesBlotting, WesternCrystallography, X-RayEnzyme ActivationEphrin-A5HEK293 CellsHumansModels, MolecularMutationProtein BindingProtein ConformationProtein MultimerizationReceptor, EphA4Ephrin-A5Receptor, EphA4crystallographyphosphorylationproteintransmembrane

Identifiers

PMID23959867
PMCPMC3767517
OpenAlexW2064974190

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.