Evidence map›Paper›PMID 23959798›Full record

ArticleMolecular and cellular biology2013

The yeast copper response is regulated by DNA damage.

Kangzhen Dong, Stephen G Addinall, David Lydall, Julian C Rutherford

Open access · hybridAbstract read
In one paragraph

Article in Molecular and cellular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Antifungal Effect of Copper Nanoparticles againstJournal of fungi (Basel, Switzerland) · 2022
    Article
  6. Article
  7. Article
  8. Copper metabolism in Saccharomyces cerevisiae: an update.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2021
    Review
  9. Article
  10. Evaluation ofG3 (Bethesda, Md.) · 2020
    Article
  11. Copper Homeostasis inFrontiers in microbiology · 2020
    Article
  12. Versatility of the Mec1Current genetics · 2019
    Review
  13. Article
  14. Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kangzhen DongInstitute for Cell and Molecular Biosciences, Medical School, Newcastle University, Newcastle upon Tyne, United Kingdom.
Stephen G Addinall
David Lydall
Julian C Rutherford
Newcastle University · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H006605/1
6 · The paper itself

Abstract

Copper is an essential but potentially toxic redox-active metal, so the levels and distribution of this metal are carefully regulated to ensure that it binds to the correct proteins. Previous studies of copper-dependent transcription in the yeast Saccharomyces cerevisiae have focused on the response of genes to changes in the exogenous levels of copper. We now report that yeast copper genes are regulated in response to the DNA-damaging agents methyl methanesulfonate (MMS) and hydroxyurea by a mechanism(s) that requires the copper-responsive transcription factors Mac1 and AceI, copper superoxide dismutase (Sod1) activity, and the Rad53 checkpoint kinase. Furthermore, in copper-starved yeast, the response of the Rad53 pathway to MMS is compromised due to a loss of Sod1 activity, consistent with the model that yeast imports copper to ensure Sod1 activity and Rad53 signaling. Crucially, the Mac1 transcription factor undergoes changes in its redox state in response to changing levels of copper or MMS. This study has therefore identified a novel regulatory relationship between cellular redox, copper homeostasis, and the DNA damage response in yeast.

Indexed as

DNA DamageCell Cycle ProteinsCheckpoint Kinase 2CopperDNA-Binding ProteinsDNA, FungalGene Expression Regulation, FungalHydroxyureaMethyl MethanesulfonateNuclear ProteinsOxidation-ReductionSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionSuperoxide DismutaseSuperoxide Dismutase-1Cell Cycle ProteinsCheckpoint Kinase 2CopperCUP2 protein, S cerevisiaeDNA-Binding ProteinsDNA, FungalHydroxyureaMAC1 protein, S cerevisiaeMethyl MethanesulfonateNuclear ProteinsRAD53 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSuperoxide DismutaseSuperoxide Dismutase-1Transcription Factors

Identifiers

PMID23959798
PMCPMC3811678
OpenAlexW2107071733

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.